Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.12■□□□□ 0.65
ALYREFQ86V81 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALYREFQ86V81 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALYREFQ86V81 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.12■□□□□ 0.65
ALYREFQ86V81 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.12■□□□□ 0.65
ALYREFQ86V81 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.12■□□□□ 0.65
ALYREFQ86V81 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.12■□□□□ 0.65
ALYREFQ86V81 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.12■□□□□ 0.65
ALYREFQ86V81 AC135050.7-201ENST00000624508 2218 ntBASIC19.12■□□□□ 0.65
ALYREFQ86V81 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALYREFQ86V81 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALYREFQ86V81 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.11■□□□□ 0.65
ALYREFQ86V81 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALYREFQ86V81 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALYREFQ86V81 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.11■□□□□ 0.65
ALYREFQ86V81 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALYREFQ86V81 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.11■□□□□ 0.65
ALYREFQ86V81 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALYREFQ86V81 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALYREFQ86V81 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALYREFQ86V81 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALYREFQ86V81 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.11■□□□□ 0.65
ALYREFQ86V81 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALYREFQ86V81 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ALYREFQ86V81 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.11■□□□□ 0.65
ALYREFQ86V81 AC112482.1-201ENST00000492080 688 ntBASIC19.11■□□□□ 0.65
ALYREFQ86V81 AF238378.1-201ENST00000526806 358 ntBASIC19.11■□□□□ 0.65
ALYREFQ86V81 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.11■□□□□ 0.65
ALYREFQ86V81 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.11■□□□□ 0.65
ALYREFQ86V81 AC134684.3-201ENST00000641758 218 ntBASIC19.11■□□□□ 0.65
ALYREFQ86V81 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ALYREFQ86V81 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ALYREFQ86V81 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALYREFQ86V81 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALYREFQ86V81 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ALYREFQ86V81 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ALYREFQ86V81 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.1■□□□□ 0.65
ALYREFQ86V81 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
ALYREFQ86V81 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALYREFQ86V81 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.1■□□□□ 0.65
ALYREFQ86V81 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALYREFQ86V81 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALYREFQ86V81 KRT18P28-201ENST00000453838 1332 ntBASIC19.1■□□□□ 0.65
ALYREFQ86V81 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALYREFQ86V81 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALYREFQ86V81 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALYREFQ86V81 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.1■□□□□ 0.65
ALYREFQ86V81 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
ALYREFQ86V81 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ALYREFQ86V81 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.1■□□□□ 0.65
ALYREFQ86V81 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.1■□□□□ 0.65
ALYREFQ86V81 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
ALYREFQ86V81 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALYREFQ86V81 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALYREFQ86V81 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.1■□□□□ 0.65
ALYREFQ86V81 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ALYREFQ86V81 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.1■□□□□ 0.65
ALYREFQ86V81 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALYREFQ86V81 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.1■□□□□ 0.65
ALYREFQ86V81 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ALYREFQ86V81 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.09■□□□□ 0.65
ALYREFQ86V81 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.09■□□□□ 0.65
ALYREFQ86V81 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 TUBB8P6-201ENST00000436895 1288 ntBASIC19.09■□□□□ 0.65
ALYREFQ86V81 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.09■□□□□ 0.65
ALYREFQ86V81 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.09■□□□□ 0.65
ALYREFQ86V81 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.09■□□□□ 0.65
ALYREFQ86V81 AC009065.1-201ENST00000564055 1225 ntBASIC19.09■□□□□ 0.65
ALYREFQ86V81 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
ALYREFQ86V81 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.09■□□□□ 0.65
ALYREFQ86V81 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
ALYREFQ86V81 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.09■□□□□ 0.65
ALYREFQ86V81 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.09■□□□□ 0.65
ALYREFQ86V81 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ALYREFQ86V81 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.09■□□□□ 0.65
ALYREFQ86V81 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.09■□□□□ 0.65
ALYREFQ86V81 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALYREFQ86V81 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.09■□□□□ 0.65
ALYREFQ86V81 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ALYREFQ86V81 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ALYREFQ86V81 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ALYREFQ86V81 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms