Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.1■□□□□ 0.97
OTOP1Q7RTM1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
OTOP1Q7RTM1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 DNAJB3-202ENST00000449667 1266 ntBASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 AC006333.2-201ENST00000607957 2099 ntBASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
OTOP1Q7RTM1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.08■□□□□ 0.97
OTOP1Q7RTM1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.08■□□□□ 0.97
OTOP1Q7RTM1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
OTOP1Q7RTM1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
OTOP1Q7RTM1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
OTOP1Q7RTM1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
OTOP1Q7RTM1 RCN1P2-201ENST00000398357 915 ntBASIC21.08■□□□□ 0.97
OTOP1Q7RTM1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.08■□□□□ 0.97
OTOP1Q7RTM1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
OTOP1Q7RTM1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.08■□□□□ 0.97
OTOP1Q7RTM1 AC040169.1-201ENST00000565382 521 ntBASIC21.08■□□□□ 0.97
OTOP1Q7RTM1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
OTOP1Q7RTM1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
OTOP1Q7RTM1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.08■□□□□ 0.96
OTOP1Q7RTM1 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.08■□□□□ 0.96
OTOP1Q7RTM1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.08■□□□□ 0.96
OTOP1Q7RTM1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 KRT89P-201ENST00000620027 1478 ntBASIC21.07■□□□□ 0.96
OTOP1Q7RTM1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 MTMR9LP-203ENST00000426597 1545 ntBASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 Z83851.2-201ENST00000609564 659 ntBASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
OTOP1Q7RTM1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms