Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 PRSS44-201ENST00000515154 1146 ntBASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 RPPH1-201ENST00000516869 333 ntBASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCHD4Q6ZW05 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 MYLKP1-201ENST00000509077 1580 ntBASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 AC004951.3-201ENST00000418645 1148 ntBASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 AC009053.2-201ENST00000563701 2365 ntBASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCHD4Q6ZW05 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 KRT16P1-201ENST00000399124 1418 ntBASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 AC008040.2-201ENST00000461049 708 ntBASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 CR392000.1-201ENST00000624770 1228 ntBASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 CROCCP1-201ENST00000426910 5675 ntBASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCHD4Q6ZW05 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.79■□□□□ 0.28
PTCHD4Q6ZW05 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms