Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
C11orf88Q6PI97 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 MTDHP1-201ENST00000605323 784 ntBASIC15.92■□□□□ 0.14
C11orf88Q6PI97 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
C11orf88Q6PI97 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 PCDHA12-202ENST00000613593 2588 ntBASIC15.91■□□□□ 0.14
C11orf88Q6PI97 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.91■□□□□ 0.14
C11orf88Q6PI97 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 AC126755.1-201ENST00000525846 6405 ntBASIC15.91■□□□□ 0.14
C11orf88Q6PI97 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.91■□□□□ 0.14
C11orf88Q6PI97 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 TNRC18P3-201ENST00000441896 2691 ntBASIC15.9■□□□□ 0.14
C11orf88Q6PI97 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms