Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TMEM53Q6P2H8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM53Q6P2H8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM53Q6P2H8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM53Q6P2H8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 RCC2P6-201ENST00000526625 1557 ntBASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 MIR6786-201ENST00000616843 113 ntBASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 AC011298.2-201ENST00000617989 482 ntBASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM53Q6P2H8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 NUDT16P1-203ENST00000513809 620 ntBASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 AC141586.3-201ENST00000562166 1838 ntBASIC16.73■□□□□ 0.27
TMEM53Q6P2H8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 KRT8P41-201ENST00000533985 1514 ntBASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 FAM207BP-201ENST00000447172 505 ntBASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 MIR4785-201ENST00000585005 73 ntBASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 AC026471.5-201ENST00000615068 467 ntBASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms