Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 FLJ38576-201ENST00000623820 2459 ntBASIC17.22■□□□□ 0.35
LPCAT4Q643R3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LPCAT4Q643R3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.21■□□□□ 0.35
LPCAT4Q643R3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
LPCAT4Q643R3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LPCAT4Q643R3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
LPCAT4Q643R3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
LPCAT4Q643R3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LPCAT4Q643R3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.19■□□□□ 0.34
LPCAT4Q643R3 LSM12P1-201ENST00000411836 588 ntBASIC17.19■□□□□ 0.34
LPCAT4Q643R3 AC093787.1-201ENST00000450396 207 ntBASIC17.19■□□□□ 0.34
LPCAT4Q643R3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms