Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN20Q4JDL3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 FAM8A6P-201ENST00000407496 1135 ntBASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 AC022616.7-201ENST00000525383 220 ntBASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPN20Q4JDL3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 AC112907.2-201ENST00000448639 330 ntBASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 AC092647.4-201ENST00000457211 535 ntBASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN20Q4JDL3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 AC138028.4-201ENST00000564984 1845 ntBASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 AC132938.6-201ENST00000623828 1655 ntBASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 HBZP1-201ENST00000354915 429 ntBASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPN20Q4JDL3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms