Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPP3CAQ08209 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPP3CAQ08209 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.71■□□□□ 0.75
PPP3CAQ08209 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPP3CAQ08209 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP3CAQ08209 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP3CAQ08209 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.7■□□□□ 0.74
PPP3CAQ08209 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP3CAQ08209 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.7■□□□□ 0.74
PPP3CAQ08209 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP3CAQ08209 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP3CAQ08209 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PPP3CAQ08209 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PPP3CAQ08209 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPP3CAQ08209 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.7■□□□□ 0.74
PPP3CAQ08209 FAM8A6P-201ENST00000407496 1135 ntBASIC19.7■□□□□ 0.74
PPP3CAQ08209 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PPP3CAQ08209 AC022616.7-201ENST00000525383 220 ntBASIC19.7■□□□□ 0.74
PPP3CAQ08209 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.7■□□□□ 0.74
PPP3CAQ08209 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PPP3CAQ08209 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.7■□□□□ 0.74
PPP3CAQ08209 AC132938.6-201ENST00000623828 1655 ntBASIC19.7■□□□□ 0.74
PPP3CAQ08209 AP000997.3-201ENST00000623333 2250 ntBASIC19.7■□□□□ 0.74
PPP3CAQ08209 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PPP3CAQ08209 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.7■□□□□ 0.74
PPP3CAQ08209 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PPP3CAQ08209 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
PPP3CAQ08209 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.7■□□□□ 0.74
PPP3CAQ08209 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.69■□□□□ 0.74
PPP3CAQ08209 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.69■□□□□ 0.74
PPP3CAQ08209 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PPP3CAQ08209 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.69■□□□□ 0.74
PPP3CAQ08209 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
PPP3CAQ08209 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.69■□□□□ 0.74
PPP3CAQ08209 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.69■□□□□ 0.74
PPP3CAQ08209 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 HBZP1-201ENST00000354915 429 ntBASIC19.69■□□□□ 0.74
PPP3CAQ08209 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.69■□□□□ 0.74
PPP3CAQ08209 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.69■□□□□ 0.74
PPP3CAQ08209 AC112907.2-201ENST00000448639 330 ntBASIC19.69■□□□□ 0.74
PPP3CAQ08209 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.69■□□□□ 0.74
PPP3CAQ08209 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.69■□□□□ 0.74
PPP3CAQ08209 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PPP3CAQ08209 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.69■□□□□ 0.74
PPP3CAQ08209 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PPP3CAQ08209 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.69■□□□□ 0.74
PPP3CAQ08209 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.69■□□□□ 0.74
PPP3CAQ08209 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPP3CAQ08209 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.68■□□□□ 0.74
PPP3CAQ08209 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PPP3CAQ08209 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.68■□□□□ 0.74
PPP3CAQ08209 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.68■□□□□ 0.74
PPP3CAQ08209 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.68■□□□□ 0.74
PPP3CAQ08209 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
PPP3CAQ08209 FAM210CP-201ENST00000445714 574 ntBASIC19.68■□□□□ 0.74
PPP3CAQ08209 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.68■□□□□ 0.74
PPP3CAQ08209 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PPP3CAQ08209 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.68■□□□□ 0.74
PPP3CAQ08209 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
PPP3CAQ08209 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PPP3CAQ08209 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.68■□□□□ 0.74
PPP3CAQ08209 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PPP3CAQ08209 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPP3CAQ08209 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms