Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGCS1Q01581 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.61■□□□□ 0.41
HMGCS1Q01581 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 C2orf69P3-201ENST00000565542 1120 ntBASIC17.61■□□□□ 0.41
HMGCS1Q01581 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGCS1Q01581 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGCS1Q01581 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGCS1Q01581 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS1Q01581 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HMGCS1Q01581 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
HMGCS1Q01581 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS1Q01581 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS1Q01581 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS1Q01581 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS1Q01581 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS1Q01581 AP000997.3-201ENST00000623333 2250 ntBASIC17.6■□□□□ 0.41
HMGCS1Q01581 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HMGCS1Q01581 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HMGCS1Q01581 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HMGCS1Q01581 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGCS1Q01581 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS1Q01581 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.6■□□□□ 0.41
HMGCS1Q01581 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS1Q01581 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGCS1Q01581 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.6■□□□□ 0.41
HMGCS1Q01581 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.6■□□□□ 0.41
HMGCS1Q01581 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGCS1Q01581 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGCS1Q01581 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS1Q01581 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS1Q01581 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HMGCS1Q01581 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HMGCS1Q01581 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS1Q01581 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGCS1Q01581 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGCS1Q01581 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS1Q01581 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS1Q01581 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS1Q01581 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS1Q01581 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGCS1Q01581 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HMGCS1Q01581 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.59■□□□□ 0.41
HMGCS1Q01581 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGCS1Q01581 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HMGCS1Q01581 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGCS1Q01581 FLJ13224-201ENST00000313737 1514 ntBASIC17.59■□□□□ 0.41
HMGCS1Q01581 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 CYP2D8P-201ENST00000433633 1490 ntBASIC17.59■□□□□ 0.41
HMGCS1Q01581 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 KRT8P7-201ENST00000533003 1432 ntBASIC17.59■□□□□ 0.41
HMGCS1Q01581 KRT8P9-201ENST00000558927 1449 ntBASIC17.59■□□□□ 0.41
HMGCS1Q01581 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HMGCS1Q01581 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.59■□□□□ 0.41
HMGCS1Q01581 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.59■□□□□ 0.41
HMGCS1Q01581 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGCS1Q01581 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HMGCS1Q01581 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS1Q01581 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGCS1Q01581 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGCS1Q01581 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.58■□□□□ 0.41
HMGCS1Q01581 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGCS1Q01581 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HMGCS1Q01581 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.58■□□□□ 0.41
HMGCS1Q01581 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.41
HMGCS1Q01581 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.58■□□□□ 0.41
HMGCS1Q01581 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.58■□□□□ 0.41
HMGCS1Q01581 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCS1Q01581 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.58■□□□□ 0.4
HMGCS1Q01581 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HMGCS1Q01581 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCS1Q01581 AC112497.1-201ENST00000624824 639 ntBASIC17.58■□□□□ 0.4
HMGCS1Q01581 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCS1Q01581 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCS1Q01581 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCS1Q01581 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCS1Q01581 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCS1Q01581 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCS1Q01581 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.58■□□□□ 0.4
HMGCS1Q01581 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCS1Q01581 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HMGCS1Q01581 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms