Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RCN1P1-201ENST00000400413 996 ntBASIC16■□□□□ 0.15
SEC61A1P61619 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16■□□□□ 0.15
SEC61A1P61619 FAM210CP-201ENST00000445714 574 ntBASIC16■□□□□ 0.15
SEC61A1P61619 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16■□□□□ 0.15
SEC61A1P61619 AP005242.2-201ENST00000580065 1175 ntBASIC16■□□□□ 0.15
SEC61A1P61619 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16■□□□□ 0.15
SEC61A1P61619 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16■□□□□ 0.15
SEC61A1P61619 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SEC61A1P61619 AC084018.2-201ENST00000613093 2607 ntBASIC16■□□□□ 0.15
SEC61A1P61619 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 AC073592.3-201ENST00000625118 1834 ntBASIC16■□□□□ 0.15
SEC61A1P61619 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SEC61A1P61619 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SEC61A1P61619 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SEC61A1P61619 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
SEC61A1P61619 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16■□□□□ 0.15
SEC61A1P61619 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEC61A1P61619 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEC61A1P61619 KRT8P41-201ENST00000533985 1514 ntBASIC15.99■□□□□ 0.15
SEC61A1P61619 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
SEC61A1P61619 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEC61A1P61619 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEC61A1P61619 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.99■□□□□ 0.15
SEC61A1P61619 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.99■□□□□ 0.15
SEC61A1P61619 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SEC61A1P61619 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SEC61A1P61619 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
SEC61A1P61619 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.99■□□□□ 0.15
SEC61A1P61619 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.99■□□□□ 0.15
SEC61A1P61619 MFAP1P1-201ENST00000442257 1255 ntBASIC15.99■□□□□ 0.15
SEC61A1P61619 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.99■□□□□ 0.15
SEC61A1P61619 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.99■□□□□ 0.15
SEC61A1P61619 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.99■□□□□ 0.15
SEC61A1P61619 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.99■□□□□ 0.15
SEC61A1P61619 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
SEC61A1P61619 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SEC61A1P61619 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SEC61A1P61619 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SEC61A1P61619 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEC61A1P61619 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.99■□□□□ 0.15
SEC61A1P61619 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEC61A1P61619 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.99■□□□□ 0.15
SEC61A1P61619 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SEC61A1P61619 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEC61A1P61619 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.99■□□□□ 0.15
SEC61A1P61619 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEC61A1P61619 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.99■□□□□ 0.15
SEC61A1P61619 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEC61A1P61619 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEC61A1P61619 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEC61A1P61619 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
SEC61A1P61619 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.98■□□□□ 0.15
SEC61A1P61619 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.98■□□□□ 0.15
SEC61A1P61619 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SEC61A1P61619 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SEC61A1P61619 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.98■□□□□ 0.15
SEC61A1P61619 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SEC61A1P61619 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SEC61A1P61619 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
SEC61A1P61619 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.98■□□□□ 0.15
SEC61A1P61619 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.98■□□□□ 0.15
SEC61A1P61619 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.98■□□□□ 0.15
SEC61A1P61619 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.98■□□□□ 0.15
SEC61A1P61619 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
SEC61A1P61619 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.98■□□□□ 0.15
SEC61A1P61619 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.98■□□□□ 0.15
SEC61A1P61619 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SEC61A1P61619 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
SEC61A1P61619 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.97■□□□□ 0.15
SEC61A1P61619 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SEC61A1P61619 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SEC61A1P61619 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.97■□□□□ 0.15
SEC61A1P61619 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.97■□□□□ 0.15
SEC61A1P61619 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms