Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS3AP61247 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RPS3AP61247 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.13■□□□□ 0.33
RPS3AP61247 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.13■□□□□ 0.33
RPS3AP61247 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS3AP61247 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPS3AP61247 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RPS3AP61247 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RPS3AP61247 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.12■□□□□ 0.33
RPS3AP61247 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.12■□□□□ 0.33
RPS3AP61247 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RPS3AP61247 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.12■□□□□ 0.33
RPS3AP61247 AC012306.2-201ENST00000609350 630 ntBASIC17.12■□□□□ 0.33
RPS3AP61247 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
RPS3AP61247 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.12■□□□□ 0.33
RPS3AP61247 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.12■□□□□ 0.33
RPS3AP61247 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.12■□□□□ 0.33
RPS3AP61247 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RPS3AP61247 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPS3AP61247 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RPS3AP61247 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.11■□□□□ 0.33
RPS3AP61247 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.11■□□□□ 0.33
RPS3AP61247 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.11■□□□□ 0.33
RPS3AP61247 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.11■□□□□ 0.33
RPS3AP61247 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.11■□□□□ 0.33
RPS3AP61247 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RPS3AP61247 TSPY17P-201ENST00000450329 467 ntBASIC17.11■□□□□ 0.33
RPS3AP61247 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.11■□□□□ 0.33
RPS3AP61247 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.11■□□□□ 0.33
RPS3AP61247 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.11■□□□□ 0.33
RPS3AP61247 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
RPS3AP61247 AC005363.2-201ENST00000618631 242 ntBASIC17.11■□□□□ 0.33
RPS3AP61247 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.11■□□□□ 0.33
RPS3AP61247 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RPS3AP61247 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.11■□□□□ 0.33
RPS3AP61247 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RPS3AP61247 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.11■□□□□ 0.33
RPS3AP61247 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RPS3AP61247 AC018695.7-201ENST00000624587 2492 ntBASIC17.11■□□□□ 0.33
RPS3AP61247 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.11■□□□□ 0.33
RPS3AP61247 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.11■□□□□ 0.33
RPS3AP61247 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RPS3AP61247 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPS3AP61247 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RPS3AP61247 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RPS3AP61247 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS3AP61247 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS3AP61247 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS3AP61247 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS3AP61247 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.1■□□□□ 0.33
RPS3AP61247 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.1■□□□□ 0.33
RPS3AP61247 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPS3AP61247 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.1■□□□□ 0.33
RPS3AP61247 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPS3AP61247 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS3AP61247 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.1■□□□□ 0.33
RPS3AP61247 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS3AP61247 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS3AP61247 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RPS3AP61247 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPS3AP61247 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.1■□□□□ 0.33
RPS3AP61247 TSPY23P-201ENST00000440136 739 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms