Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.02□□□□□ -0.33
UBE2D3P61077 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.02□□□□□ -0.33
UBE2D3P61077 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D3P61077 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D3P61077 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D3P61077 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D3P61077 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D3P61077 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2D3P61077 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UBE2D3P61077 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 AC135776.1-201ENST00000319817 2481 ntBASIC13.01□□□□□ -0.33
UBE2D3P61077 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 MIR564-202ENST00000385049 94 ntBASIC13.01□□□□□ -0.33
UBE2D3P61077 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 AL023284.2-201ENST00000405850 579 ntBASIC13.01□□□□□ -0.33
UBE2D3P61077 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 MFAP1P1-201ENST00000442257 1255 ntBASIC13.01□□□□□ -0.33
UBE2D3P61077 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UBE2D3P61077 AC116562.2-201ENST00000507042 360 ntBASIC13.01□□□□□ -0.33
UBE2D3P61077 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2D3P61077 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.01□□□□□ -0.33
UBE2D3P61077 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2D3P61077 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.01□□□□□ -0.33
UBE2D3P61077 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2D3P61077 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.01□□□□□ -0.33
UBE2D3P61077 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2D3P61077 SLC25A1P4-201ENST00000567977 778 ntBASIC13.01□□□□□ -0.33
UBE2D3P61077 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
UBE2D3P61077 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.01□□□□□ -0.33
UBE2D3P61077 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UBE2D3P61077 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
UBE2D3P61077 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
UBE2D3P61077 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
UBE2D3P61077 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.01□□□□□ -0.33
UBE2D3P61077 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2D3P61077 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
UBE2D3P61077 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
UBE2D3P61077 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
UBE2D3P61077 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D3P61077 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
UBE2D3P61077 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
UBE2D3P61077 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13□□□□□ -0.33
UBE2D3P61077 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13□□□□□ -0.33
UBE2D3P61077 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
UBE2D3P61077 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13□□□□□ -0.33
UBE2D3P61077 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13□□□□□ -0.33
UBE2D3P61077 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13□□□□□ -0.33
UBE2D3P61077 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13□□□□□ -0.33
UBE2D3P61077 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13□□□□□ -0.33
UBE2D3P61077 NUDT16P1-203ENST00000513809 620 ntBASIC13□□□□□ -0.33
UBE2D3P61077 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13□□□□□ -0.33
UBE2D3P61077 AP001412.1-201ENST00000608405 714 ntBASIC13□□□□□ -0.33
UBE2D3P61077 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
UBE2D3P61077 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13□□□□□ -0.33
UBE2D3P61077 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 MST1L-201ENST00000442552 2185 ntBASIC13□□□□□ -0.33
UBE2D3P61077 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBE2D3P61077 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2D3P61077 AC093677.2-201ENST00000600169 1863 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms