Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3P56703 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
WNT3P56703 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3P56703 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3P56703 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3P56703 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
WNT3P56703 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3P56703 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3P56703 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.28■□□□□ 0.36
WNT3P56703 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.27■□□□□ 0.36
WNT3P56703 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
WNT3P56703 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.27■□□□□ 0.36
WNT3P56703 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.27■□□□□ 0.36
WNT3P56703 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.27■□□□□ 0.36
WNT3P56703 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
WNT3P56703 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3P56703 AL024508.2-201ENST00000607749 1894 ntBASIC17.27■□□□□ 0.36
WNT3P56703 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3P56703 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3P56703 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
WNT3P56703 CCR12P-201ENST00000446203 998 ntBASIC17.27■□□□□ 0.36
WNT3P56703 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.27■□□□□ 0.36
WNT3P56703 AC092865.7-201ENST00000641832 219 ntBASIC17.27■□□□□ 0.36
WNT3P56703 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.27■□□□□ 0.36
WNT3P56703 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3P56703 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3P56703 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3P56703 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.27■□□□□ 0.35
WNT3P56703 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
WNT3P56703 AC006116.8-202ENST00000587620 1550 ntBASIC17.27■□□□□ 0.35
WNT3P56703 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.27■□□□□ 0.35
WNT3P56703 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.27■□□□□ 0.35
WNT3P56703 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
WNT3P56703 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
WNT3P56703 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3P56703 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
WNT3P56703 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
WNT3P56703 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.26■□□□□ 0.35
WNT3P56703 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3P56703 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3P56703 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3P56703 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.26■□□□□ 0.35
WNT3P56703 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3P56703 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3P56703 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
WNT3P56703 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3P56703 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3P56703 AL137013.1-201ENST00000432946 1228 ntBASIC17.26■□□□□ 0.35
WNT3P56703 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.26■□□□□ 0.35
WNT3P56703 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.26■□□□□ 0.35
WNT3P56703 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3P56703 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.26■□□□□ 0.35
WNT3P56703 C2orf69P3-201ENST00000565542 1120 ntBASIC17.26■□□□□ 0.35
WNT3P56703 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.26■□□□□ 0.35
WNT3P56703 AL445228.2-201ENST00000605589 952 ntBASIC17.26■□□□□ 0.35
WNT3P56703 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
WNT3P56703 AC116562.4-202ENST00000641738 218 ntBASIC17.26■□□□□ 0.35
WNT3P56703 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3P56703 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3P56703 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
WNT3P56703 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.26■□□□□ 0.35
WNT3P56703 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3P56703 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
WNT3P56703 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3P56703 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3P56703 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3P56703 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
WNT3P56703 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
WNT3P56703 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
WNT3P56703 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
WNT3P56703 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.25■□□□□ 0.35
WNT3P56703 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.25■□□□□ 0.35
WNT3P56703 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 AC012317.2-201ENST00000623305 2251 ntBASIC17.25■□□□□ 0.35
WNT3P56703 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.25■□□□□ 0.35
WNT3P56703 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.25■□□□□ 0.35
WNT3P56703 MIR3180-4-201ENST00000582223 153 ntBASIC17.25■□□□□ 0.35
WNT3P56703 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
WNT3P56703 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
WNT3P56703 AC112497.1-201ENST00000624824 639 ntBASIC17.25■□□□□ 0.35
WNT3P56703 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 LTB4R2-202ENST00000528054 3092 ntBASIC17.25■□□□□ 0.35
WNT3P56703 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
WNT3P56703 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms