Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH13P55290 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 GNAS-203ENST00000306120 1878 ntBASIC17.88■□□□□ 0.45
CDH13P55290 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 AC009102.3-201ENST00000623118 1491 ntBASIC17.88■□□□□ 0.45
CDH13P55290 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CDH13P55290 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH13P55290 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH13P55290 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH13P55290 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH13P55290 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
CDH13P55290 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH13P55290 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDH13P55290 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH13P55290 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH13P55290 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.87■□□□□ 0.45
CDH13P55290 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CDH13P55290 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH13P55290 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDH13P55290 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH13P55290 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CDH13P55290 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH13P55290 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH13P55290 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH13P55290 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH13P55290 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH13P55290 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CDH13P55290 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH13P55290 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CDH13P55290 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.86■□□□□ 0.45
CDH13P55290 UNC93B2-201ENST00000285383 730 ntBASIC17.86■□□□□ 0.45
CDH13P55290 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CDH13P55290 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH13P55290 AL390955.1-201ENST00000428694 934 ntBASIC17.86■□□□□ 0.45
CDH13P55290 KRT18P23-201ENST00000435622 1283 ntBASIC17.86■□□□□ 0.45
CDH13P55290 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.86■□□□□ 0.45
CDH13P55290 AL353719.1-201ENST00000566847 864 ntBASIC17.86■□□□□ 0.45
CDH13P55290 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CDH13P55290 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH13P55290 CR769767.2-201ENST00000622735 460 ntBASIC17.86■□□□□ 0.45
CDH13P55290 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH13P55290 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH13P55290 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH13P55290 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH13P55290 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH13P55290 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH13P55290 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH13P55290 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH13P55290 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH13P55290 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH13P55290 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH13P55290 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH13P55290 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH13P55290 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDH13P55290 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDH13P55290 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH13P55290 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.85■□□□□ 0.45
CDH13P55290 SLC25A6P5-201ENST00000435663 894 ntBASIC17.85■□□□□ 0.45
CDH13P55290 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.85■□□□□ 0.45
CDH13P55290 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH13P55290 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH13P55290 AC008550.1-201ENST00000511500 884 ntBASIC17.85■□□□□ 0.45
CDH13P55290 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH13P55290 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH13P55290 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.85■□□□□ 0.45
CDH13P55290 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH13P55290 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH13P55290 AP000525.1-201ENST00000608286 694 ntBASIC17.85■□□□□ 0.45
CDH13P55290 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH13P55290 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH13P55290 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CDH13P55290 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH13P55290 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CDH13P55290 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH13P55290 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH13P55290 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH13P55290 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH13P55290 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms