Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATXN3P54252 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ATXN3P54252 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATXN3P54252 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATXN3P54252 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATXN3P54252 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATXN3P54252 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATXN3P54252 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATXN3P54252 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.62■□□□□ 0.57
ATXN3P54252 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATXN3P54252 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ATXN3P54252 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.62■□□□□ 0.57
ATXN3P54252 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.62■□□□□ 0.57
ATXN3P54252 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATXN3P54252 KRT8P26-201ENST00000534154 1276 ntBASIC18.62■□□□□ 0.57
ATXN3P54252 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.62■□□□□ 0.57
ATXN3P54252 GPALPP1-207ENST00000611650 899 ntBASIC18.62■□□□□ 0.57
ATXN3P54252 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATXN3P54252 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.62■□□□□ 0.57
ATXN3P54252 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATXN3P54252 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ATXN3P54252 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATXN3P54252 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.62■□□□□ 0.57
ATXN3P54252 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATXN3P54252 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ATXN3P54252 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATXN3P54252 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATXN3P54252 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATXN3P54252 AC006333.2-201ENST00000607957 2099 ntBASIC18.62■□□□□ 0.57
ATXN3P54252 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATXN3P54252 PCDHB18P-201ENST00000524813 2368 ntBASIC18.62■□□□□ 0.57
ATXN3P54252 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.62■□□□□ 0.57
ATXN3P54252 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATXN3P54252 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATXN3P54252 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.61■□□□□ 0.57
ATXN3P54252 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATXN3P54252 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATXN3P54252 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATXN3P54252 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.61■□□□□ 0.57
ATXN3P54252 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.61■□□□□ 0.57
ATXN3P54252 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
ATXN3P54252 KRT18P1-202ENST00000452408 1331 ntBASIC18.61■□□□□ 0.57
ATXN3P54252 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATXN3P54252 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATXN3P54252 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATXN3P54252 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATXN3P54252 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATXN3P54252 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.61■□□□□ 0.57
ATXN3P54252 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.61■□□□□ 0.57
ATXN3P54252 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATXN3P54252 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.61■□□□□ 0.57
ATXN3P54252 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.61■□□□□ 0.57
ATXN3P54252 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.61■□□□□ 0.57
ATXN3P54252 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATXN3P54252 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ATXN3P54252 IFNL4P1-201ENST00000607083 540 ntBASIC18.61■□□□□ 0.57
ATXN3P54252 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATXN3P54252 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATXN3P54252 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATXN3P54252 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATXN3P54252 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATXN3P54252 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATXN3P54252 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATXN3P54252 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
ATXN3P54252 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATXN3P54252 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ATXN3P54252 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATXN3P54252 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATXN3P54252 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ATXN3P54252 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.6■□□□□ 0.57
ATXN3P54252 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.6■□□□□ 0.57
ATXN3P54252 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.6■□□□□ 0.57
ATXN3P54252 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.6■□□□□ 0.57
ATXN3P54252 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ATXN3P54252 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ATXN3P54252 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.6■□□□□ 0.57
ATXN3P54252 UNC93B7-201ENST00000509439 705 ntBASIC18.6■□□□□ 0.57
ATXN3P54252 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.6■□□□□ 0.57
ATXN3P54252 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.6■□□□□ 0.57
ATXN3P54252 AL121772.3-201ENST00000610840 674 ntBASIC18.6■□□□□ 0.57
ATXN3P54252 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
ATXN3P54252 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.6■□□□□ 0.57
ATXN3P54252 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATXN3P54252 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms