Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.13■□□□□ 0.81
CDK7P50613 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.13■□□□□ 0.81
CDK7P50613 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.13■□□□□ 0.81
CDK7P50613 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.13■□□□□ 0.81
CDK7P50613 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.13■□□□□ 0.81
CDK7P50613 SART3-203ENST00000546611 1184 ntBASIC20.13■□□□□ 0.81
CDK7P50613 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDK7P50613 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.13■□□□□ 0.81
CDK7P50613 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.13■□□□□ 0.81
CDK7P50613 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK7P50613 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.13■□□□□ 0.81
CDK7P50613 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDK7P50613 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.13■□□□□ 0.81
CDK7P50613 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK7P50613 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK7P50613 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.13■□□□□ 0.81
CDK7P50613 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK7P50613 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CDK7P50613 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK7P50613 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CDK7P50613 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDK7P50613 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CDK7P50613 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK7P50613 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK7P50613 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK7P50613 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.12■□□□□ 0.81
CDK7P50613 AC034105.1-201ENST00000563488 319 ntBASIC20.12■□□□□ 0.81
CDK7P50613 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.12■□□□□ 0.81
CDK7P50613 AC140113.2-201ENST00000604370 208 ntBASIC20.12■□□□□ 0.81
CDK7P50613 AL691403.2-201ENST00000618460 490 ntBASIC20.12■□□□□ 0.81
CDK7P50613 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CDK7P50613 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK7P50613 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK7P50613 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CDK7P50613 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK7P50613 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.12■□□□□ 0.81
CDK7P50613 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CDK7P50613 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDK7P50613 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.11■□□□□ 0.81
CDK7P50613 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK7P50613 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK7P50613 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CDK7P50613 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.11■□□□□ 0.81
CDK7P50613 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDK7P50613 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK7P50613 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.11■□□□□ 0.81
CDK7P50613 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.11■□□□□ 0.81
CDK7P50613 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.11■□□□□ 0.81
CDK7P50613 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.11■□□□□ 0.81
CDK7P50613 ABCD1P5-201ENST00000445663 754 ntBASIC20.11■□□□□ 0.81
CDK7P50613 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.11■□□□□ 0.81
CDK7P50613 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.11■□□□□ 0.81
CDK7P50613 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.11■□□□□ 0.81
CDK7P50613 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.11■□□□□ 0.81
CDK7P50613 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK7P50613 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK7P50613 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDK7P50613 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.11■□□□□ 0.81
CDK7P50613 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK7P50613 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.11■□□□□ 0.81
CDK7P50613 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK7P50613 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDK7P50613 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDK7P50613 AC125634.1-201ENST00000438758 1403 ntBASIC20.1■□□□□ 0.81
CDK7P50613 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.1■□□□□ 0.81
CDK7P50613 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDK7P50613 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.1■□□□□ 0.81
CDK7P50613 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDK7P50613 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.1■□□□□ 0.81
CDK7P50613 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.1■□□□□ 0.81
CDK7P50613 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.1■□□□□ 0.81
CDK7P50613 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDK7P50613 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.1■□□□□ 0.81
CDK7P50613 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDK7P50613 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.1■□□□□ 0.81
CDK7P50613 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.1■□□□□ 0.81
CDK7P50613 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.1■□□□□ 0.81
CDK7P50613 UPF3AP3-201ENST00000420996 769 ntBASIC20.1■□□□□ 0.81
CDK7P50613 RPS2P1-201ENST00000434010 821 ntBASIC20.1■□□□□ 0.81
CDK7P50613 MTCL1P1-201ENST00000446207 792 ntBASIC20.1■□□□□ 0.81
CDK7P50613 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.1■□□□□ 0.81
CDK7P50613 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.1■□□□□ 0.81
CDK7P50613 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.1■□□□□ 0.81
CDK7P50613 AC012640.2-201ENST00000561606 901 ntBASIC20.1■□□□□ 0.81
CDK7P50613 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDK7P50613 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDK7P50613 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.1■□□□□ 0.81
CDK7P50613 AL356488.2-201ENST00000602755 427 ntBASIC20.1■□□□□ 0.81
CDK7P50613 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.1■□□□□ 0.81
CDK7P50613 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.1■□□□□ 0.81
CDK7P50613 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDK7P50613 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.1■□□□□ 0.81
CDK7P50613 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CDK7P50613 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.1■□□□□ 0.81
CDK7P50613 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDK7P50613 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDK7P50613 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK7P50613 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CDK7P50613 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK7P50613 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms