Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.91□□□□□ -0.02
CDX1P47902 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.91□□□□□ -0.02
CDX1P47902 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.91□□□□□ -0.02
CDX1P47902 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDX1P47902 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDX1P47902 ABALON-201ENST00000629058 1903 ntBASIC14.91□□□□□ -0.02
CDX1P47902 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDX1P47902 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDX1P47902 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDX1P47902 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDX1P47902 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDX1P47902 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDX1P47902 AC006333.2-201ENST00000607957 2099 ntBASIC14.91□□□□□ -0.02
CDX1P47902 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDX1P47902 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDX1P47902 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDX1P47902 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.91□□□□□ -0.02
CDX1P47902 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CDX1P47902 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.9□□□□□ -0.02
CDX1P47902 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.9□□□□□ -0.02
CDX1P47902 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CDX1P47902 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.9□□□□□ -0.02
CDX1P47902 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CDX1P47902 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CDX1P47902 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.9□□□□□ -0.02
CDX1P47902 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 TSPY14P-201ENST00000303979 915 ntBASIC14.9□□□□□ -0.02
CDX1P47902 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CDX1P47902 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDX1P47902 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.9□□□□□ -0.02
CDX1P47902 MFAP1P1-201ENST00000442257 1255 ntBASIC14.9□□□□□ -0.02
CDX1P47902 FAM210CP-201ENST00000445714 574 ntBASIC14.9□□□□□ -0.02
CDX1P47902 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.9□□□□□ -0.02
CDX1P47902 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.9□□□□□ -0.02
CDX1P47902 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.9□□□□□ -0.02
CDX1P47902 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.9□□□□□ -0.02
CDX1P47902 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.9□□□□□ -0.02
CDX1P47902 AC005363.2-201ENST00000618631 242 ntBASIC14.9□□□□□ -0.02
CDX1P47902 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.9□□□□□ -0.02
CDX1P47902 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDX1P47902 KRT8P41-201ENST00000533985 1514 ntBASIC14.9□□□□□ -0.02
CDX1P47902 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CDX1P47902 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDX1P47902 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDX1P47902 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.9□□□□□ -0.02
CDX1P47902 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CDX1P47902 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDX1P47902 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.89□□□□□ -0.03
CDX1P47902 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.89□□□□□ -0.03
CDX1P47902 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.89□□□□□ -0.03
CDX1P47902 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDX1P47902 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.89□□□□□ -0.03
CDX1P47902 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.89□□□□□ -0.03
CDX1P47902 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.89□□□□□ -0.03
CDX1P47902 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.89□□□□□ -0.03
CDX1P47902 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.89□□□□□ -0.03
CDX1P47902 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.89□□□□□ -0.03
CDX1P47902 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.89□□□□□ -0.03
CDX1P47902 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.89□□□□□ -0.03
CDX1P47902 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.89□□□□□ -0.03
CDX1P47902 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 AC008764.6-201ENST00000595909 2069 ntBASIC14.89□□□□□ -0.03
CDX1P47902 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.89□□□□□ -0.03
CDX1P47902 AC073592.3-201ENST00000625118 1834 ntBASIC14.89□□□□□ -0.03
CDX1P47902 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDX1P47902 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms