Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
EPHA3P29320 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.78■□□□□ 0.44
EPHA3P29320 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
EPHA3P29320 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.78■□□□□ 0.44
EPHA3P29320 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
EPHA3P29320 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 AL023284.2-201ENST00000405850 579 ntBASIC17.78■□□□□ 0.44
EPHA3P29320 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 AC011506.1-201ENST00000474329 610 ntBASIC17.78■□□□□ 0.44
EPHA3P29320 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
EPHA3P29320 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.78■□□□□ 0.44
EPHA3P29320 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.78■□□□□ 0.44
EPHA3P29320 RN7SL471P-201ENST00000580476 299 ntBASIC17.78■□□□□ 0.44
EPHA3P29320 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
EPHA3P29320 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
EPHA3P29320 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
EPHA3P29320 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.78■□□□□ 0.44
EPHA3P29320 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
EPHA3P29320 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.78■□□□□ 0.44
EPHA3P29320 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.78■□□□□ 0.44
EPHA3P29320 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHA3P29320 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EPHA3P29320 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.77■□□□□ 0.44
EPHA3P29320 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EPHA3P29320 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EPHA3P29320 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EPHA3P29320 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
EPHA3P29320 GPAT2P1-201ENST00000444924 1672 ntBASIC17.77■□□□□ 0.44
EPHA3P29320 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
EPHA3P29320 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EPHA3P29320 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
EPHA3P29320 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
EPHA3P29320 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EPHA3P29320 AC034236.2-201ENST00000606662 1610 ntBASIC17.77■□□□□ 0.44
EPHA3P29320 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.77■□□□□ 0.44
EPHA3P29320 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EPHA3P29320 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.77■□□□□ 0.44
EPHA3P29320 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.77■□□□□ 0.44
EPHA3P29320 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EPHA3P29320 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.77■□□□□ 0.44
EPHA3P29320 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
EPHA3P29320 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
EPHA3P29320 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.77■□□□□ 0.43
EPHA3P29320 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
EPHA3P29320 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
EPHA3P29320 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
EPHA3P29320 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
EPHA3P29320 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
EPHA3P29320 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.77■□□□□ 0.43
EPHA3P29320 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
EPHA3P29320 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
EPHA3P29320 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
EPHA3P29320 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.76■□□□□ 0.43
EPHA3P29320 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHA3P29320 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHA3P29320 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHA3P29320 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EPHA3P29320 SDHAP2-201ENST00000455183 2001 ntBASIC17.76■□□□□ 0.43
EPHA3P29320 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHA3P29320 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.76■□□□□ 0.43
EPHA3P29320 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EPHA3P29320 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.76■□□□□ 0.43
EPHA3P29320 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHA3P29320 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EPHA3P29320 ESRRAP1-201ENST00000400596 1257 ntBASIC17.76■□□□□ 0.43
EPHA3P29320 MCCD1P1-208ENST00000445732 328 ntBASIC17.76■□□□□ 0.43
EPHA3P29320 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.76■□□□□ 0.43
EPHA3P29320 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.76■□□□□ 0.43
EPHA3P29320 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.76■□□□□ 0.43
EPHA3P29320 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.76■□□□□ 0.43
EPHA3P29320 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHA3P29320 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
EPHA3P29320 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHA3P29320 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EPHA3P29320 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
EPHA3P29320 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.76■□□□□ 0.43
EPHA3P29320 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHA3P29320 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.76■□□□□ 0.43
EPHA3P29320 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHA3P29320 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EPHA3P29320 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
EPHA3P29320 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms