Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT4P19013 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT4P19013 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.34■□□□□ 0.53
KRT4P19013 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
KRT4P19013 AC104771.1-201ENST00000603335 964 ntBASIC18.34■□□□□ 0.53
KRT4P19013 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 AC011298.2-201ENST00000617989 482 ntBASIC18.34■□□□□ 0.53
KRT4P19013 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT4P19013 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KRT4P19013 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT4P19013 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.34■□□□□ 0.53
KRT4P19013 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.33■□□□□ 0.53
KRT4P19013 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT4P19013 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.33■□□□□ 0.53
KRT4P19013 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.33■□□□□ 0.53
KRT4P19013 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRT4P19013 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRT4P19013 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRT4P19013 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRT4P19013 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT4P19013 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.33■□□□□ 0.53
KRT4P19013 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT4P19013 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT4P19013 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
KRT4P19013 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT4P19013 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT4P19013 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT4P19013 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT4P19013 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.33■□□□□ 0.52
KRT4P19013 AC008040.2-201ENST00000461049 708 ntBASIC18.33■□□□□ 0.52
KRT4P19013 AC026366.1-201ENST00000488803 879 ntBASIC18.33■□□□□ 0.52
KRT4P19013 AP002982.1-201ENST00000492365 877 ntBASIC18.33■□□□□ 0.52
KRT4P19013 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT4P19013 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.33■□□□□ 0.52
KRT4P19013 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.33■□□□□ 0.52
KRT4P19013 AC124016.1-201ENST00000609552 612 ntBASIC18.33■□□□□ 0.52
KRT4P19013 AC008622.2-201ENST00000617006 1229 ntBASIC18.33■□□□□ 0.52
KRT4P19013 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.33■□□□□ 0.52
KRT4P19013 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
KRT4P19013 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT4P19013 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT4P19013 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT4P19013 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
KRT4P19013 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT4P19013 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT4P19013 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT4P19013 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT4P19013 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 PKD1P1-201ENST00000458669 6805 ntBASIC18.32■□□□□ 0.52
KRT4P19013 KRT8P50-201ENST00000562022 1438 ntBASIC18.32■□□□□ 0.52
KRT4P19013 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.32■□□□□ 0.52
KRT4P19013 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT4P19013 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
KRT4P19013 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT4P19013 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
KRT4P19013 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT4P19013 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
KRT4P19013 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
KRT4P19013 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.32■□□□□ 0.52
KRT4P19013 KSR1P1-201ENST00000446298 240 ntBASIC18.32■□□□□ 0.52
KRT4P19013 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
KRT4P19013 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.32■□□□□ 0.52
KRT4P19013 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
KRT4P19013 AL353708.3-201ENST00000610272 989 ntBASIC18.32■□□□□ 0.52
KRT4P19013 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
KRT4P19013 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
KRT4P19013 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
KRT4P19013 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT4P19013 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms