Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COL11A1P12107 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.65■□□□□ 0.9
COL11A1P12107 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COL11A1P12107 POLD2P1-201ENST00000511220 997 ntBASIC20.65■□□□□ 0.9
COL11A1P12107 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.65■□□□□ 0.9
COL11A1P12107 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A1P12107 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.65■□□□□ 0.9
COL11A1P12107 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.65■□□□□ 0.9
COL11A1P12107 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.65■□□□□ 0.9
COL11A1P12107 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COL11A1P12107 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A1P12107 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A1P12107 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A1P12107 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.65■□□□□ 0.9
COL11A1P12107 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A1P12107 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
COL11A1P12107 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A1P12107 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.64■□□□□ 0.9
COL11A1P12107 RPS2P1-201ENST00000434010 821 ntBASIC20.64■□□□□ 0.9
COL11A1P12107 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.64■□□□□ 0.9
COL11A1P12107 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
COL11A1P12107 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.64■□□□□ 0.9
COL11A1P12107 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COL11A1P12107 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
COL11A1P12107 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
COL11A1P12107 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL11A1P12107 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL11A1P12107 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.64■□□□□ 0.89
COL11A1P12107 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.64■□□□□ 0.89
COL11A1P12107 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL11A1P12107 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL11A1P12107 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL11A1P12107 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
COL11A1P12107 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.64■□□□□ 0.89
COL11A1P12107 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
COL11A1P12107 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.64■□□□□ 0.89
COL11A1P12107 AC132008.2-207ENST00000454517 770 ntBASIC20.64■□□□□ 0.89
COL11A1P12107 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL11A1P12107 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.64■□□□□ 0.89
COL11A1P12107 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.64■□□□□ 0.89
COL11A1P12107 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.64■□□□□ 0.89
COL11A1P12107 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.64■□□□□ 0.89
COL11A1P12107 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL11A1P12107 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
COL11A1P12107 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
COL11A1P12107 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL11A1P12107 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A1P12107 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.63■□□□□ 0.89
COL11A1P12107 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A1P12107 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
COL11A1P12107 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A1P12107 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
COL11A1P12107 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A1P12107 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A1P12107 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A1P12107 RNPS1P1-201ENST00000507437 918 ntBASIC20.63■□□□□ 0.89
COL11A1P12107 PGAM5P1-201ENST00000518923 814 ntBASIC20.63■□□□□ 0.89
COL11A1P12107 OR7E14P-202ENST00000530490 1290 ntBASIC20.63■□□□□ 0.89
COL11A1P12107 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.63■□□□□ 0.89
COL11A1P12107 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.63■□□□□ 0.89
COL11A1P12107 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.63■□□□□ 0.89
COL11A1P12107 AC106730.1-201ENST00000566722 1090 ntBASIC20.63■□□□□ 0.89
COL11A1P12107 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A1P12107 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A1P12107 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A1P12107 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL11A1P12107 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
COL11A1P12107 RPL13AP23-201ENST00000480739 586 ntBASIC20.62■□□□□ 0.89
COL11A1P12107 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A1P12107 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.62■□□□□ 0.89
COL11A1P12107 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A1P12107 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A1P12107 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.62■□□□□ 0.89
COL11A1P12107 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A1P12107 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
COL11A1P12107 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A1P12107 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.62■□□□□ 0.89
COL11A1P12107 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.62■□□□□ 0.89
COL11A1P12107 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL11A1P12107 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.62■□□□□ 0.89
COL11A1P12107 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A1P12107 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.61■□□□□ 0.89
COL11A1P12107 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
COL11A1P12107 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A1P12107 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.61■□□□□ 0.89
COL11A1P12107 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
COL11A1P12107 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A1P12107 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A1P12107 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.61■□□□□ 0.89
COL11A1P12107 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A1P12107 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.61■□□□□ 0.89
COL11A1P12107 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COL11A1P12107 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A1P12107 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.61■□□□□ 0.89
COL11A1P12107 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A1P12107 KLF4P1-201ENST00000412782 1185 ntBASIC20.61■□□□□ 0.89
COL11A1P12107 AC098831.1-202ENST00000438821 336 ntBASIC20.61■□□□□ 0.89
COL11A1P12107 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.61■□□□□ 0.89
COL11A1P12107 MTDHP4-201ENST00000600287 670 ntBASIC20.61■□□□□ 0.89
COL11A1P12107 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms