Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
UBCP0CG48 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.03■□□□□ 0.16
UBCP0CG48 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.03■□□□□ 0.16
UBCP0CG48 MIR4651-201ENST00000582622 73 ntBASIC16.03■□□□□ 0.16
UBCP0CG48 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.03■□□□□ 0.16
UBCP0CG48 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.03■□□□□ 0.16
UBCP0CG48 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.03■□□□□ 0.16
UBCP0CG48 AL359736.2-201ENST00000621992 437 ntBASIC16.03■□□□□ 0.16
UBCP0CG48 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
UBCP0CG48 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
UBCP0CG48 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
UBCP0CG48 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
UBCP0CG48 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBCP0CG48 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
UBCP0CG48 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
UBCP0CG48 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
UBCP0CG48 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.02■□□□□ 0.16
UBCP0CG48 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
UBCP0CG48 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
UBCP0CG48 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.02■□□□□ 0.16
UBCP0CG48 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBCP0CG48 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.02■□□□□ 0.16
UBCP0CG48 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBCP0CG48 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.02■□□□□ 0.16
UBCP0CG48 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
UBCP0CG48 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBCP0CG48 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBCP0CG48 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBCP0CG48 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.02■□□□□ 0.16
UBCP0CG48 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBCP0CG48 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBCP0CG48 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBCP0CG48 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
UBCP0CG48 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.02■□□□□ 0.16
UBCP0CG48 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.02■□□□□ 0.16
UBCP0CG48 AC116562.2-201ENST00000507042 360 ntBASIC16.02■□□□□ 0.16
UBCP0CG48 NUDT16P1-203ENST00000513809 620 ntBASIC16.02■□□□□ 0.16
UBCP0CG48 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.02■□□□□ 0.16
UBCP0CG48 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.02■□□□□ 0.16
UBCP0CG48 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.02■□□□□ 0.16
UBCP0CG48 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
UBCP0CG48 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBCP0CG48 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
UBCP0CG48 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
UBCP0CG48 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBCP0CG48 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBCP0CG48 SIRPAP1-201ENST00000448467 1770 ntBASIC16.02■□□□□ 0.15
UBCP0CG48 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
UBCP0CG48 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
UBCP0CG48 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBCP0CG48 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
UBCP0CG48 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBCP0CG48 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBCP0CG48 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBCP0CG48 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
UBCP0CG48 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBCP0CG48 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBCP0CG48 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.01■□□□□ 0.15
UBCP0CG48 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.01■□□□□ 0.15
UBCP0CG48 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.01■□□□□ 0.15
UBCP0CG48 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.01■□□□□ 0.15
UBCP0CG48 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.01■□□□□ 0.15
UBCP0CG48 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.01■□□□□ 0.15
UBCP0CG48 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
UBCP0CG48 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.01■□□□□ 0.15
UBCP0CG48 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.01■□□□□ 0.15
UBCP0CG48 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
UBCP0CG48 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBCP0CG48 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.01■□□□□ 0.15
UBCP0CG48 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms