Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.95■□□□□ 0.78
COL1A2P08123 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.95■□□□□ 0.78
COL1A2P08123 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
COL1A2P08123 SLC25A6P4-201ENST00000586535 553 ntBASIC19.95■□□□□ 0.78
COL1A2P08123 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.95■□□□□ 0.78
COL1A2P08123 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.95■□□□□ 0.78
COL1A2P08123 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.95■□□□□ 0.78
COL1A2P08123 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A2P08123 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.94■□□□□ 0.78
COL1A2P08123 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A2P08123 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A2P08123 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.94■□□□□ 0.78
COL1A2P08123 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A2P08123 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A2P08123 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A2P08123 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A2P08123 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A2P08123 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
COL1A2P08123 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A2P08123 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
COL1A2P08123 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COL1A2P08123 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A2P08123 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.94■□□□□ 0.78
COL1A2P08123 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A2P08123 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A2P08123 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
COL1A2P08123 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A2P08123 AL662844.1-201ENST00000546340 181 ntBASIC19.94■□□□□ 0.78
COL1A2P08123 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.94■□□□□ 0.78
COL1A2P08123 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.94■□□□□ 0.78
COL1A2P08123 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A2P08123 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A2P08123 INTS4P1-201ENST00000438455 1935 ntBASIC19.94■□□□□ 0.78
COL1A2P08123 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A2P08123 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
COL1A2P08123 BX323043.1-201ENST00000641006 1765 ntBASIC19.94■□□□□ 0.78
COL1A2P08123 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A2P08123 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COL1A2P08123 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
COL1A2P08123 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COL1A2P08123 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
COL1A2P08123 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.93■□□□□ 0.78
COL1A2P08123 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.93■□□□□ 0.78
COL1A2P08123 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.93■□□□□ 0.78
COL1A2P08123 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL1A2P08123 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A2P08123 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A2P08123 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A2P08123 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COL1A2P08123 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.92■□□□□ 0.78
COL1A2P08123 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A2P08123 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A2P08123 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COL1A2P08123 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.92■□□□□ 0.78
COL1A2P08123 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COL1A2P08123 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A2P08123 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A2P08123 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.92■□□□□ 0.78
COL1A2P08123 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.92■□□□□ 0.78
COL1A2P08123 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A2P08123 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A2P08123 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
COL1A2P08123 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A2P08123 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COL1A2P08123 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL1A2P08123 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.92■□□□□ 0.78
COL1A2P08123 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.91■□□□□ 0.78
COL1A2P08123 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.91■□□□□ 0.78
COL1A2P08123 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A2P08123 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COL1A2P08123 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.91■□□□□ 0.78
COL1A2P08123 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A2P08123 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.91■□□□□ 0.78
COL1A2P08123 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
COL1A2P08123 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A2P08123 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A2P08123 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A2P08123 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A2P08123 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A2P08123 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.91■□□□□ 0.78
COL1A2P08123 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.91■□□□□ 0.78
COL1A2P08123 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.91■□□□□ 0.78
COL1A2P08123 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms