Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD4P01730 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.13■□□□□ 0.81
CD4P01730 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD4P01730 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD4P01730 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD4P01730 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD4P01730 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.12■□□□□ 0.81
CD4P01730 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CD4P01730 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.12■□□□□ 0.81
CD4P01730 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
CD4P01730 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD4P01730 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD4P01730 RPS2P28-201ENST00000314255 741 ntBASIC20.12■□□□□ 0.81
CD4P01730 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CD4P01730 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CD4P01730 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.12■□□□□ 0.81
CD4P01730 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.12■□□□□ 0.81
CD4P01730 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.12■□□□□ 0.81
CD4P01730 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CD4P01730 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.12■□□□□ 0.81
CD4P01730 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD4P01730 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CD4P01730 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
CD4P01730 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CD4P01730 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CD4P01730 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CD4P01730 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.12■□□□□ 0.81
CD4P01730 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
CD4P01730 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.12■□□□□ 0.81
CD4P01730 INTS4P1-201ENST00000438455 1935 ntBASIC20.12■□□□□ 0.81
CD4P01730 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CD4P01730 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CD4P01730 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD4P01730 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD4P01730 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CD4P01730 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.11■□□□□ 0.81
CD4P01730 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.11■□□□□ 0.81
CD4P01730 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CD4P01730 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.11■□□□□ 0.81
CD4P01730 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.11■□□□□ 0.81
CD4P01730 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.11■□□□□ 0.81
CD4P01730 AC083906.6-201ENST00000641366 219 ntBASIC20.11■□□□□ 0.81
CD4P01730 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD4P01730 AL049812.1-201ENST00000432563 2267 ntBASIC20.11■□□□□ 0.81
CD4P01730 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD4P01730 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD4P01730 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD4P01730 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CD4P01730 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CD4P01730 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.1■□□□□ 0.81
CD4P01730 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD4P01730 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD4P01730 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD4P01730 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CD4P01730 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.1■□□□□ 0.81
CD4P01730 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.1■□□□□ 0.81
CD4P01730 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.1■□□□□ 0.81
CD4P01730 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD4P01730 AC009533.2-201ENST00000543664 586 ntBASIC20.1■□□□□ 0.81
CD4P01730 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.1■□□□□ 0.81
CD4P01730 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.1■□□□□ 0.81
CD4P01730 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.1■□□□□ 0.81
CD4P01730 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CD4P01730 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.1■□□□□ 0.81
CD4P01730 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CD4P01730 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD4P01730 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
CD4P01730 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CD4P01730 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD4P01730 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CD4P01730 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CD4P01730 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.09■□□□□ 0.81
CD4P01730 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CD4P01730 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.09■□□□□ 0.81
CD4P01730 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 MIR149-201ENST00000384879 89 ntBASIC20.09■□□□□ 0.81
CD4P01730 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.09■□□□□ 0.81
CD4P01730 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.09■□□□□ 0.81
CD4P01730 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.09■□□□□ 0.81
CD4P01730 AC008687.5-201ENST00000593746 558 ntBASIC20.09■□□□□ 0.81
CD4P01730 AL138831.2-201ENST00000606564 490 ntBASIC20.09■□□□□ 0.81
CD4P01730 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.09■□□□□ 0.81
CD4P01730 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.09■□□□□ 0.81
CD4P01730 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD4P01730 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms