Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-CO1P00395 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-CO1P00395 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-CO1P00395 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-CO1P00395 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-CO1P00395 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-CO1P00395 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
MT-CO1P00395 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.7■□□□□ 0.58
MT-CO1P00395 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.7■□□□□ 0.58
MT-CO1P00395 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MT-CO1P00395 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.7■□□□□ 0.58
MT-CO1P00395 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MT-CO1P00395 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.7■□□□□ 0.58
MT-CO1P00395 RNF126P1-202ENST00000569893 925 ntBASIC18.7■□□□□ 0.58
MT-CO1P00395 AC011498.5-201ENST00000592027 486 ntBASIC18.7■□□□□ 0.58
MT-CO1P00395 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.7■□□□□ 0.58
MT-CO1P00395 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.7■□□□□ 0.58
MT-CO1P00395 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.7■□□□□ 0.58
MT-CO1P00395 AC018470.1-201ENST00000624790 3129 ntBASIC18.7■□□□□ 0.58
MT-CO1P00395 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MT-CO1P00395 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MT-CO1P00395 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MT-CO1P00395 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MT-CO1P00395 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-CO1P00395 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MT-CO1P00395 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
MT-CO1P00395 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MT-CO1P00395 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MT-CO1P00395 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
MT-CO1P00395 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
MT-CO1P00395 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MT-CO1P00395 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.69■□□□□ 0.58
MT-CO1P00395 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.69■□□□□ 0.58
MT-CO1P00395 AC126763.1-201ENST00000552015 2118 ntBASIC18.69■□□□□ 0.58
MT-CO1P00395 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.69■□□□□ 0.58
MT-CO1P00395 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.69■□□□□ 0.58
MT-CO1P00395 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-CO1P00395 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.69■□□□□ 0.58
MT-CO1P00395 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-CO1P00395 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-CO1P00395 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.69■□□□□ 0.58
MT-CO1P00395 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-CO1P00395 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MT-CO1P00395 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-CO1P00395 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MT-CO1P00395 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-CO1P00395 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.69■□□□□ 0.58
MT-CO1P00395 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
MT-CO1P00395 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-CO1P00395 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MT-CO1P00395 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.68■□□□□ 0.58
MT-CO1P00395 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.68■□□□□ 0.58
MT-CO1P00395 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.68■□□□□ 0.58
MT-CO1P00395 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 MIR149-201ENST00000384879 89 ntBASIC18.68■□□□□ 0.58
MT-CO1P00395 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.68■□□□□ 0.58
MT-CO1P00395 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.68■□□□□ 0.58
MT-CO1P00395 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.68■□□□□ 0.58
MT-CO1P00395 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 AC009065.1-201ENST00000564055 1225 ntBASIC18.68■□□□□ 0.58
MT-CO1P00395 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.68■□□□□ 0.58
MT-CO1P00395 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MT-CO1P00395 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MT-CO1P00395 AC093458.2-201ENST00000623150 629 ntBASIC18.68■□□□□ 0.58
MT-CO1P00395 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.68■□□□□ 0.58
MT-CO1P00395 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MT-CO1P00395 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO1P00395 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-CO1P00395 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-CO1P00395 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-CO1P00395 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
MT-CO1P00395 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-CO1P00395 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-CO1P00395 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MT-CO1P00395 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-CO1P00395 AC009102.3-201ENST00000623118 1491 ntBASIC18.67■□□□□ 0.58
MT-CO1P00395 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-CO1P00395 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-CO1P00395 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-CO1P00395 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-CO1P00395 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.67■□□□□ 0.58
MT-CO1P00395 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms