Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.23■□□□□ 0.19
CNOT4O95628 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CNOT4O95628 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.23■□□□□ 0.19
CNOT4O95628 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.23■□□□□ 0.19
CNOT4O95628 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.23■□□□□ 0.19
CNOT4O95628 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.23■□□□□ 0.19
CNOT4O95628 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CNOT4O95628 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.23■□□□□ 0.19
CNOT4O95628 AC069148.1-201ENST00000608741 768 ntBASIC16.23■□□□□ 0.19
CNOT4O95628 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CNOT4O95628 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.23■□□□□ 0.19
CNOT4O95628 AC116407.4-201ENST00000623319 1061 ntBASIC16.23■□□□□ 0.19
CNOT4O95628 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.23■□□□□ 0.19
CNOT4O95628 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.23■□□□□ 0.19
CNOT4O95628 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.23■□□□□ 0.19
CNOT4O95628 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.23■□□□□ 0.19
CNOT4O95628 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNOT4O95628 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.22■□□□□ 0.19
CNOT4O95628 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT4O95628 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT4O95628 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.22■□□□□ 0.19
CNOT4O95628 AC005332.1-201ENST00000577698 1310 ntBASIC16.22■□□□□ 0.19
CNOT4O95628 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT4O95628 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT4O95628 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CNOT4O95628 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT4O95628 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.22■□□□□ 0.19
CNOT4O95628 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CNOT4O95628 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CNOT4O95628 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CNOT4O95628 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT4O95628 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.22■□□□□ 0.19
CNOT4O95628 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT4O95628 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CNOT4O95628 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT4O95628 MIR662-201ENST00000384847 95 ntBASIC16.22■□□□□ 0.19
CNOT4O95628 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.22■□□□□ 0.19
CNOT4O95628 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CNOT4O95628 AC092597.1-201ENST00000487352 616 ntBASIC16.22■□□□□ 0.19
CNOT4O95628 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
CNOT4O95628 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT4O95628 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.22■□□□□ 0.19
CNOT4O95628 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
CNOT4O95628 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.22■□□□□ 0.19
CNOT4O95628 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT4O95628 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT4O95628 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CNOT4O95628 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT4O95628 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT4O95628 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.22■□□□□ 0.19
CNOT4O95628 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CNOT4O95628 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT4O95628 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.22■□□□□ 0.19
CNOT4O95628 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CNOT4O95628 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CNOT4O95628 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.21■□□□□ 0.19
CNOT4O95628 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT4O95628 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT4O95628 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT4O95628 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CNOT4O95628 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.21■□□□□ 0.19
CNOT4O95628 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT4O95628 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT4O95628 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CNOT4O95628 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT4O95628 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT4O95628 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.21■□□□□ 0.19
CNOT4O95628 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT4O95628 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT4O95628 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.21■□□□□ 0.19
CNOT4O95628 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT4O95628 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT4O95628 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.21■□□□□ 0.19
CNOT4O95628 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT4O95628 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.21■□□□□ 0.19
CNOT4O95628 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT4O95628 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CNOT4O95628 AL645929.1-201ENST00000420084 975 ntBASIC16.21■□□□□ 0.19
CNOT4O95628 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.21■□□□□ 0.19
CNOT4O95628 CLEC4GP1-201ENST00000596555 870 ntBASIC16.21■□□□□ 0.19
CNOT4O95628 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.21■□□□□ 0.19
CNOT4O95628 AC079602.3-201ENST00000623931 403 ntBASIC16.21■□□□□ 0.19
CNOT4O95628 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CNOT4O95628 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT4O95628 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CNOT4O95628 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT4O95628 AC009102.3-201ENST00000623118 1491 ntBASIC16.21■□□□□ 0.19
CNOT4O95628 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CNOT4O95628 AC026471.1-201ENST00000564629 3026 ntBASIC16.21■□□□□ 0.18
CNOT4O95628 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms