Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
BEST1O76090 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.13■□□□□ 0.65
BEST1O76090 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
BEST1O76090 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BEST1O76090 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BEST1O76090 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.12■□□□□ 0.65
BEST1O76090 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BEST1O76090 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.12■□□□□ 0.65
BEST1O76090 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.12■□□□□ 0.65
BEST1O76090 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BEST1O76090 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BEST1O76090 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.12■□□□□ 0.65
BEST1O76090 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.12■□□□□ 0.65
BEST1O76090 AL845331.1-201ENST00000424978 1190 ntBASIC19.12■□□□□ 0.65
BEST1O76090 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BEST1O76090 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BEST1O76090 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.12■□□□□ 0.65
BEST1O76090 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BEST1O76090 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BEST1O76090 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BEST1O76090 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.12■□□□□ 0.65
BEST1O76090 AC090616.6-201ENST00000582640 721 ntBASIC19.12■□□□□ 0.65
BEST1O76090 AC008687.5-201ENST00000593746 558 ntBASIC19.12■□□□□ 0.65
BEST1O76090 AC092329.2-201ENST00000598402 547 ntBASIC19.12■□□□□ 0.65
BEST1O76090 AL592071.1-201ENST00000611956 408 ntBASIC19.12■□□□□ 0.65
BEST1O76090 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BEST1O76090 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.12■□□□□ 0.65
BEST1O76090 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
BEST1O76090 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
BEST1O76090 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
BEST1O76090 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
BEST1O76090 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BEST1O76090 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
BEST1O76090 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BEST1O76090 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
BEST1O76090 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
BEST1O76090 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.12■□□□□ 0.65
BEST1O76090 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.12■□□□□ 0.65
BEST1O76090 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
BEST1O76090 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
BEST1O76090 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BEST1O76090 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
BEST1O76090 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BEST1O76090 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BEST1O76090 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.11■□□□□ 0.65
BEST1O76090 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.11■□□□□ 0.65
BEST1O76090 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
BEST1O76090 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
BEST1O76090 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BEST1O76090 DRAXINP1-201ENST00000437611 948 ntBASIC19.11■□□□□ 0.65
BEST1O76090 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
BEST1O76090 AC091607.1-201ENST00000490318 1060 ntBASIC19.11■□□□□ 0.65
BEST1O76090 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
BEST1O76090 KRT18P56-201ENST00000507275 550 ntBASIC19.11■□□□□ 0.65
BEST1O76090 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.11■□□□□ 0.65
BEST1O76090 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.11■□□□□ 0.65
BEST1O76090 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.11■□□□□ 0.65
BEST1O76090 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BEST1O76090 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BEST1O76090 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.11■□□□□ 0.65
BEST1O76090 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BEST1O76090 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BEST1O76090 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BEST1O76090 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
BEST1O76090 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
BEST1O76090 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
BEST1O76090 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BEST1O76090 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BEST1O76090 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
BEST1O76090 AL096828.2-201ENST00000567259 1965 ntBASIC19.1■□□□□ 0.65
BEST1O76090 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BEST1O76090 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
BEST1O76090 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BEST1O76090 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.1■□□□□ 0.65
BEST1O76090 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BEST1O76090 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BEST1O76090 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.1■□□□□ 0.65
BEST1O76090 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
BEST1O76090 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.1■□□□□ 0.65
BEST1O76090 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BEST1O76090 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.1■□□□□ 0.65
BEST1O76090 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
BEST1O76090 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BEST1O76090 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.1■□□□□ 0.65
BEST1O76090 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
BEST1O76090 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.1■□□□□ 0.65
BEST1O76090 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.1■□□□□ 0.65
BEST1O76090 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.1■□□□□ 0.65
BEST1O76090 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BEST1O76090 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BEST1O76090 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
BEST1O76090 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BEST1O76090 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BEST1O76090 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
BEST1O76090 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.09■□□□□ 0.65
BEST1O76090 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BEST1O76090 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
BEST1O76090 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
BEST1O76090 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BEST1O76090 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms