Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
GPC4O75487 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
GPC4O75487 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 AC073592.3-201ENST00000625118 1834 ntBASIC18.31■□□□□ 0.52
GPC4O75487 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.31■□□□□ 0.52
GPC4O75487 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
GPC4O75487 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.31■□□□□ 0.52
GPC4O75487 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
GPC4O75487 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.31■□□□□ 0.52
GPC4O75487 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
GPC4O75487 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.31■□□□□ 0.52
GPC4O75487 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.31■□□□□ 0.52
GPC4O75487 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC4O75487 KRT8P45-201ENST00000414328 1447 ntBASIC18.31■□□□□ 0.52
GPC4O75487 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.31■□□□□ 0.52
GPC4O75487 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC4O75487 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.3■□□□□ 0.52
GPC4O75487 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC4O75487 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC4O75487 AC036111.1-201ENST00000533973 1582 ntBASIC18.3■□□□□ 0.52
GPC4O75487 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
GPC4O75487 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GPC4O75487 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.3■□□□□ 0.52
GPC4O75487 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC4O75487 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC4O75487 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GPC4O75487 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC4O75487 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC4O75487 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GPC4O75487 AC211429.1-201ENST00000415277 523 ntBASIC18.3■□□□□ 0.52
GPC4O75487 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.3■□□□□ 0.52
GPC4O75487 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.3■□□□□ 0.52
GPC4O75487 KRT18P41-201ENST00000518924 1277 ntBASIC18.3■□□□□ 0.52
GPC4O75487 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.3■□□□□ 0.52
GPC4O75487 AC126763.1-201ENST00000552015 2118 ntBASIC18.3■□□□□ 0.52
GPC4O75487 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
GPC4O75487 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.3■□□□□ 0.52
GPC4O75487 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.3■□□□□ 0.52
GPC4O75487 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GPC4O75487 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC4O75487 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
GPC4O75487 AC068880.1-201ENST00000507289 2297 ntBASIC18.3■□□□□ 0.52
GPC4O75487 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GPC4O75487 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.3■□□□□ 0.52
GPC4O75487 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
GPC4O75487 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC4O75487 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.3■□□□□ 0.52
GPC4O75487 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
GPC4O75487 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
GPC4O75487 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.29■□□□□ 0.52
GPC4O75487 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.29■□□□□ 0.52
GPC4O75487 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
GPC4O75487 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.29■□□□□ 0.52
GPC4O75487 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
GPC4O75487 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
GPC4O75487 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.29■□□□□ 0.52
GPC4O75487 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.29■□□□□ 0.52
GPC4O75487 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
GPC4O75487 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
GPC4O75487 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
GPC4O75487 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC4O75487 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC4O75487 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
GPC4O75487 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.28■□□□□ 0.52
GPC4O75487 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC4O75487 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GPC4O75487 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
GPC4O75487 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC4O75487 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC4O75487 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC4O75487 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GPC4O75487 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GPC4O75487 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GPC4O75487 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms