Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.79■□□□□ 0.6
TSPAN3O60637 LINC00265-3P-201ENST00000447588 903 ntBASIC18.79■□□□□ 0.6
TSPAN3O60637 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.79■□□□□ 0.6
TSPAN3O60637 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.79■□□□□ 0.6
TSPAN3O60637 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.79■□□□□ 0.6
TSPAN3O60637 AC124864.1-201ENST00000623408 392 ntBASIC18.79■□□□□ 0.6
TSPAN3O60637 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 AC093503.3-201ENST00000624917 2352 ntBASIC18.79■□□□□ 0.6
TSPAN3O60637 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TSPAN3O60637 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TSPAN3O60637 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TSPAN3O60637 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.79■□□□□ 0.6
TSPAN3O60637 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.78■□□□□ 0.6
TSPAN3O60637 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.78■□□□□ 0.6
TSPAN3O60637 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.78■□□□□ 0.6
TSPAN3O60637 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.78■□□□□ 0.6
TSPAN3O60637 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.78■□□□□ 0.6
TSPAN3O60637 AP000867.3-201ENST00000524675 377 ntBASIC18.78■□□□□ 0.6
TSPAN3O60637 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.78■□□□□ 0.6
TSPAN3O60637 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.78■□□□□ 0.6
TSPAN3O60637 TPSP2-201ENST00000561760 610 ntBASIC18.78■□□□□ 0.6
TSPAN3O60637 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.78■□□□□ 0.6
TSPAN3O60637 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TSPAN3O60637 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TSPAN3O60637 TNXA-203ENST00000507684 2038 ntBASIC18.78■□□□□ 0.6
TSPAN3O60637 KRT89P-201ENST00000620027 1478 ntBASIC18.77■□□□□ 0.6
TSPAN3O60637 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN3O60637 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN3O60637 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN3O60637 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN3O60637 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN3O60637 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TSPAN3O60637 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN3O60637 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.77■□□□□ 0.6
TSPAN3O60637 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN3O60637 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.77■□□□□ 0.6
TSPAN3O60637 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN3O60637 TOB2P1-201ENST00000469761 992 ntBASIC18.77■□□□□ 0.6
TSPAN3O60637 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN3O60637 GUSBP12-201ENST00000513727 720 ntBASIC18.77■□□□□ 0.6
TSPAN3O60637 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN3O60637 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.77■□□□□ 0.6
TSPAN3O60637 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.77■□□□□ 0.6
TSPAN3O60637 MIR3652-201ENST00000579335 131 ntBASIC18.77■□□□□ 0.6
TSPAN3O60637 AC090616.6-201ENST00000582640 721 ntBASIC18.77■□□□□ 0.6
TSPAN3O60637 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN3O60637 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.77■□□□□ 0.6
TSPAN3O60637 BX323043.1-201ENST00000641006 1765 ntBASIC18.77■□□□□ 0.6
TSPAN3O60637 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TSPAN3O60637 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN3O60637 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN3O60637 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN3O60637 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN3O60637 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.77■□□□□ 0.6
TSPAN3O60637 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TSPAN3O60637 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TSPAN3O60637 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.77■□□□□ 0.59
TSPAN3O60637 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TSPAN3O60637 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TSPAN3O60637 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
TSPAN3O60637 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN3O60637 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN3O60637 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.76■□□□□ 0.59
TSPAN3O60637 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.76■□□□□ 0.59
TSPAN3O60637 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.76■□□□□ 0.59
TSPAN3O60637 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN3O60637 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN3O60637 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN3O60637 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN3O60637 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.76■□□□□ 0.59
TSPAN3O60637 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TSPAN3O60637 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TSPAN3O60637 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms