Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.3■□□□□ 0.36
SPTBN2O15020 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.3■□□□□ 0.36
SPTBN2O15020 AC073592.5-201ENST00000624854 528 ntBASIC17.3■□□□□ 0.36
SPTBN2O15020 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SPTBN2O15020 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPTBN2O15020 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPTBN2O15020 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPTBN2O15020 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPTBN2O15020 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPTBN2O15020 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPTBN2O15020 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.29■□□□□ 0.36
SPTBN2O15020 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.29■□□□□ 0.36
SPTBN2O15020 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.29■□□□□ 0.36
SPTBN2O15020 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SPTBN2O15020 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.29■□□□□ 0.36
SPTBN2O15020 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.29■□□□□ 0.36
SPTBN2O15020 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.29■□□□□ 0.36
SPTBN2O15020 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.29■□□□□ 0.36
SPTBN2O15020 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.29■□□□□ 0.36
SPTBN2O15020 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPTBN2O15020 AC073314.1-201ENST00000568729 2216 ntBASIC17.29■□□□□ 0.36
SPTBN2O15020 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SPTBN2O15020 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.29■□□□□ 0.36
SPTBN2O15020 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.29■□□□□ 0.36
SPTBN2O15020 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPTBN2O15020 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SPTBN2O15020 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SPTBN2O15020 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPTBN2O15020 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.29■□□□□ 0.36
SPTBN2O15020 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.29■□□□□ 0.36
SPTBN2O15020 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.29■□□□□ 0.36
SPTBN2O15020 AC093520.2-201ENST00000561830 333 ntBASIC17.29■□□□□ 0.36
SPTBN2O15020 AC025678.2-201ENST00000562061 970 ntBASIC17.29■□□□□ 0.36
SPTBN2O15020 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SPTBN2O15020 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.29■□□□□ 0.36
SPTBN2O15020 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPTBN2O15020 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPTBN2O15020 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPTBN2O15020 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SPTBN2O15020 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SPTBN2O15020 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SPTBN2O15020 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.28■□□□□ 0.36
SPTBN2O15020 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPTBN2O15020 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SPTBN2O15020 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SPTBN2O15020 ELK2BP-201ENST00000415014 1224 ntBASIC17.28■□□□□ 0.36
SPTBN2O15020 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.28■□□□□ 0.36
SPTBN2O15020 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPTBN2O15020 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.28■□□□□ 0.36
SPTBN2O15020 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SPTBN2O15020 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
SPTBN2O15020 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.28■□□□□ 0.36
SPTBN2O15020 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPTBN2O15020 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPTBN2O15020 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.28■□□□□ 0.36
SPTBN2O15020 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SPTBN2O15020 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPTBN2O15020 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.28■□□□□ 0.36
SPTBN2O15020 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.28■□□□□ 0.36
SPTBN2O15020 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPTBN2O15020 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SPTBN2O15020 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SPTBN2O15020 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SPTBN2O15020 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.28■□□□□ 0.36
SPTBN2O15020 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.28■□□□□ 0.36
SPTBN2O15020 ACTG1P14-201ENST00000446382 1122 ntBASIC17.28■□□□□ 0.36
SPTBN2O15020 RNA5SP421-201ENST00000516864 134 ntBASIC17.28■□□□□ 0.36
SPTBN2O15020 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SPTBN2O15020 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.28■□□□□ 0.36
SPTBN2O15020 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.28■□□□□ 0.36
SPTBN2O15020 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.28■□□□□ 0.36
SPTBN2O15020 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.28■□□□□ 0.36
SPTBN2O15020 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPTBN2O15020 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.28■□□□□ 0.36
SPTBN2O15020 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SPTBN2O15020 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SPTBN2O15020 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SPTBN2O15020 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.27■□□□□ 0.36
SPTBN2O15020 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.27■□□□□ 0.36
SPTBN2O15020 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPTBN2O15020 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SPTBN2O15020 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPTBN2O15020 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SPTBN2O15020 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPTBN2O15020 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SPTBN2O15020 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPTBN2O15020 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.27■□□□□ 0.36
SPTBN2O15020 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SPTBN2O15020 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.27■□□□□ 0.36
SPTBN2O15020 AC113404.2-201ENST00000507884 177 ntBASIC17.27■□□□□ 0.36
SPTBN2O15020 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.27■□□□□ 0.36
SPTBN2O15020 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPTBN2O15020 AC022145.2-201ENST00000598203 171 ntBASIC17.27■□□□□ 0.36
SPTBN2O15020 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.27■□□□□ 0.36
SPTBN2O15020 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.27■□□□□ 0.36
SPTBN2O15020 LINC00628-201ENST00000628516 1289 ntBASIC17.27■□□□□ 0.36
SPTBN2O15020 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.27■□□□□ 0.35
SPTBN2O15020 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SPTBN2O15020 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SPTBN2O15020 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms