Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
C4orf47A7E2U8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.81■□□□□ 0.44
C4orf47A7E2U8 RNA5SP416-201ENST00000516838 111 ntBASIC17.81■□□□□ 0.44
C4orf47A7E2U8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
C4orf47A7E2U8 AP005117.1-201ENST00000584346 1413 ntBASIC17.81■□□□□ 0.44
C4orf47A7E2U8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 AC009533.2-201ENST00000543664 586 ntBASIC17.8■□□□□ 0.44
C4orf47A7E2U8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
C4orf47A7E2U8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 INTS4P1-201ENST00000438455 1935 ntBASIC17.79■□□□□ 0.44
C4orf47A7E2U8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 MIR3197-201ENST00000582241 73 ntBASIC17.79■□□□□ 0.44
C4orf47A7E2U8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
C4orf47A7E2U8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 AC004832.2-201ENST00000426397 482 ntBASIC17.78■□□□□ 0.44
C4orf47A7E2U8 AC007967.2-201ENST00000432613 625 ntBASIC17.78■□□□□ 0.44
C4orf47A7E2U8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms