Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.95■□□□□ 0.62
SRRM3A6NNA2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 TSPY14P-201ENST00000303979 915 ntBASIC18.94■□□□□ 0.62
SRRM3A6NNA2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 FAM207BP-201ENST00000447172 505 ntBASIC18.94■□□□□ 0.62
SRRM3A6NNA2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 AC139887.4-201ENST00000607877 719 ntBASIC18.94■□□□□ 0.62
SRRM3A6NNA2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 AL121956.5-201ENST00000625261 221 ntBASIC18.94■□□□□ 0.62
SRRM3A6NNA2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 AC080080.1-201ENST00000625121 2420 ntBASIC18.94■□□□□ 0.62
SRRM3A6NNA2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRRM3A6NNA2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 AC135776.1-201ENST00000319817 2481 ntBASIC18.93■□□□□ 0.62
SRRM3A6NNA2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 KSR1P1-201ENST00000446298 240 ntBASIC18.93■□□□□ 0.62
SRRM3A6NNA2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SRRM3A6NNA2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 AC092647.4-201ENST00000457211 535 ntBASIC18.92■□□□□ 0.62
SRRM3A6NNA2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.92■□□□□ 0.62
SRRM3A6NNA2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SRRM3A6NNA2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SRRM3A6NNA2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms