Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC53A6NM62 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LRRC53A6NM62 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRC53A6NM62 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LRRC53A6NM62 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC53A6NM62 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC53A6NM62 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LRRC53A6NM62 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC53A6NM62 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.69■□□□□ 0.74
LRRC53A6NM62 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LRRC53A6NM62 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC53A6NM62 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC53A6NM62 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC53A6NM62 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LRRC53A6NM62 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.69■□□□□ 0.74
LRRC53A6NM62 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRC53A6NM62 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LRRC53A6NM62 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRC53A6NM62 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRC53A6NM62 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC53A6NM62 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC53A6NM62 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC53A6NM62 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC53A6NM62 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC53A6NM62 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.68■□□□□ 0.74
LRRC53A6NM62 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC53A6NM62 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC53A6NM62 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC53A6NM62 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.68■□□□□ 0.74
LRRC53A6NM62 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC53A6NM62 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC53A6NM62 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC53A6NM62 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.68■□□□□ 0.74
LRRC53A6NM62 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.68■□□□□ 0.74
LRRC53A6NM62 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.68■□□□□ 0.74
LRRC53A6NM62 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC53A6NM62 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LRRC53A6NM62 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC53A6NM62 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LRRC53A6NM62 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC53A6NM62 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC53A6NM62 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.68■□□□□ 0.74
LRRC53A6NM62 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LRRC53A6NM62 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LRRC53A6NM62 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
LRRC53A6NM62 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
LRRC53A6NM62 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC53A6NM62 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LRRC53A6NM62 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.68■□□□□ 0.74
LRRC53A6NM62 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC53A6NM62 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC53A6NM62 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC53A6NM62 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LRRC53A6NM62 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LRRC53A6NM62 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC53A6NM62 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC53A6NM62 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC53A6NM62 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC53A6NM62 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC53A6NM62 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC53A6NM62 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LRRC53A6NM62 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC53A6NM62 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.67■□□□□ 0.74
LRRC53A6NM62 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.67■□□□□ 0.74
LRRC53A6NM62 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC53A6NM62 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.67■□□□□ 0.74
LRRC53A6NM62 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC53A6NM62 FITM1-202ENST00000559294 800 ntBASIC19.67■□□□□ 0.74
LRRC53A6NM62 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.67■□□□□ 0.74
LRRC53A6NM62 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.67■□□□□ 0.74
LRRC53A6NM62 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC53A6NM62 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.67■□□□□ 0.74
LRRC53A6NM62 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC53A6NM62 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC53A6NM62 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC53A6NM62 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC53A6NM62 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC53A6NM62 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC53A6NM62 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC53A6NM62 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC53A6NM62 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC53A6NM62 AC006116.8-202ENST00000587620 1550 ntBASIC19.66■□□□□ 0.74
LRRC53A6NM62 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC53A6NM62 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC53A6NM62 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.66■□□□□ 0.74
LRRC53A6NM62 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LRRC53A6NM62 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC53A6NM62 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC53A6NM62 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC53A6NM62 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.66■□□□□ 0.74
LRRC53A6NM62 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC53A6NM62 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.66■□□□□ 0.74
LRRC53A6NM62 AC008550.1-201ENST00000511500 884 ntBASIC19.66■□□□□ 0.74
LRRC53A6NM62 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.66■□□□□ 0.74
LRRC53A6NM62 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC53A6NM62 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LRRC53A6NM62 AL024508.2-201ENST00000607749 1894 ntBASIC19.66■□□□□ 0.74
LRRC53A6NM62 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.66■□□□□ 0.74
LRRC53A6NM62 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC53A6NM62 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms