Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 AC093520.2-201ENST00000561830 333 ntBASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 AC004877.2-201ENST00000623941 599 ntBASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TMEM88BA6NKF7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 AC004461.1-201ENST00000412461 403 ntBASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 INGX-202ENST00000489074 768 ntBASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 AL390955.2-201ENST00000603032 514 ntBASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 AC004706.3-202ENST00000621574 984 ntBASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 AC009102.3-201ENST00000623118 1491 ntBASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM88BA6NKF7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 TERF1P3-201ENST00000505638 1227 ntBASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 AC093214.1-201ENST00000511688 1107 ntBASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM88BA6NKF7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 ELK2BP-201ENST00000415014 1224 ntBASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 IGHV3-65-201ENST00000523210 341 ntBASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 AC004790.2-201ENST00000623588 572 ntBASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 LINC00628-201ENST00000628516 1289 ntBASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 AC105339.1-204ENST00000636249 355 ntBASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 LINC00602-201ENST00000629776 2065 ntBASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 AC006504.4-201ENST00000592118 1568 ntBASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM88BA6NKF7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TMEM88BA6NKF7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM88BA6NKF7 IRX1P1-201ENST00000438849 1838 ntBASIC21.08■□□□□ 0.97
TMEM88BA6NKF7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM88BA6NKF7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM88BA6NKF7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM88BA6NKF7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
TMEM88BA6NKF7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM88BA6NKF7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM88BA6NKF7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms