Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 SPDYE15P-201ENST00000424157 909 ntBASIC18.54■□□□□ 0.56
CAPN8A6NHC0 AC092647.4-201ENST00000457211 535 ntBASIC18.54■□□□□ 0.56
CAPN8A6NHC0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.54■□□□□ 0.56
CAPN8A6NHC0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 STARP1-201ENST00000397973 869 ntBASIC18.53■□□□□ 0.56
CAPN8A6NHC0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 FAM8A6P-201ENST00000407496 1135 ntBASIC18.53■□□□□ 0.56
CAPN8A6NHC0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 AC009065.1-201ENST00000564055 1225 ntBASIC18.53■□□□□ 0.56
CAPN8A6NHC0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 NOC2LP2-201ENST00000407594 1944 ntBASIC18.53■□□□□ 0.56
CAPN8A6NHC0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CAPN8A6NHC0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 AC068880.1-201ENST00000507289 2297 ntBASIC18.52■□□□□ 0.56
CAPN8A6NHC0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 AC090164.3-201ENST00000610780 2143 ntBASIC18.52■□□□□ 0.56
CAPN8A6NHC0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 RASA4DP-201ENST00000460726 1199 ntBASIC18.52■□□□□ 0.56
CAPN8A6NHC0 AL359075.1-203ENST00000462729 1002 ntBASIC18.52■□□□□ 0.56
CAPN8A6NHC0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 AL157888.1-201ENST00000631930 593 ntBASIC18.52■□□□□ 0.56
CAPN8A6NHC0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 AL163051.1-201ENST00000569214 1512 ntBASIC18.52■□□□□ 0.56
CAPN8A6NHC0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.52■□□□□ 0.56
CAPN8A6NHC0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN8A6NHC0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN8A6NHC0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN8A6NHC0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN8A6NHC0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN8A6NHC0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN8A6NHC0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms