Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.93■□□□□ 0.14
SHISA3A0PJX4 AC008622.2-201ENST00000617006 1229 ntBASIC15.93■□□□□ 0.14
SHISA3A0PJX4 AL445675.2-201ENST00000620291 557 ntBASIC15.93■□□□□ 0.14
SHISA3A0PJX4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.93■□□□□ 0.14
SHISA3A0PJX4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 MIR564-202ENST00000385049 94 ntBASIC15.92■□□□□ 0.14
SHISA3A0PJX4 SLC29A4P1-201ENST00000398760 971 ntBASIC15.92■□□□□ 0.14
SHISA3A0PJX4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SHISA3A0PJX4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 HTR7P1-202ENST00000624664 4411 ntBASIC15.91■□□□□ 0.14
SHISA3A0PJX4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 PCDH8P1-201ENST00000428983 2773 ntBASIC15.91■□□□□ 0.14
SHISA3A0PJX4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SHISA3A0PJX4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.9■□□□□ 0.14
SHISA3A0PJX4 AC046158.3-201ENST00000624947 2558 ntBASIC15.9■□□□□ 0.14
SHISA3A0PJX4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms