Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 POM121L13P-201ENST00000422362 380 ntBASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 UNC93B4-201ENST00000505679 747 ntBASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 AC083906.2-201ENST00000511578 360 ntBASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 AC138932.1-201ENST00000534164 6830 ntBASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 CROCCP5-201ENST00000436658 830 ntBASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 GUSBP6-202ENST00000438529 1198 ntBASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 AC026185.1-201ENST00000445748 174 ntBASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 AC091390.4-202ENST00000476426 537 ntBASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 MIR4758-201ENST00000577688 71 ntBASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 AC083880.1-201ENST00000608266 535 ntBASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV3S1A0A5B6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TCRBV3S1A0A5B6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.08■□□□□ 0.33
TCRBV3S1A0A5B6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 AC034236.2-201ENST00000606662 1610 ntBASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 AC004980.1-204ENST00000429707 299 ntBASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 HCG11-201ENST00000411553 5696 ntBASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV3S1A0A5B6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV3S1A0A5B6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV3S1A0A5B6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV3S1A0A5B6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.07■□□□□ 0.32
TCRBV3S1A0A5B6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.07■□□□□ 0.32
TCRBV3S1A0A5B6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TCRBV3S1A0A5B6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV3S1A0A5B6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.07■□□□□ 0.32
TCRBV3S1A0A5B6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV3S1A0A5B6 AC099343.3-201ENST00000605834 2503 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms