Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 SOX15-203ENST00000570788 1093 ntBASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 AC006058.3-201ENST00000606217 1069 ntBASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 FLJ38576-201ENST00000623820 2459 ntBASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV9-2A0A087WT02 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 ABHD17AP1-201ENST00000358206 933 ntBASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 PRKY-204ENST00000533551 1019 ntBASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 AC008687.6-201ENST00000596318 630 ntBASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 AL121761.2-201ENST00000598007 1648 ntBASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TRAV9-2A0A087WT02 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 POM121L13P-201ENST00000422362 380 ntBASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms