Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV18A0A075B6X5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 RARRES2P6-201ENST00000567333 442 ntBASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 PHGDH-209ENST00000641074 1780 ntBASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV18A0A075B6X5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 AC006116.8-202ENST00000587620 1550 ntBASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 AC006970.2-201ENST00000450065 779 ntBASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 AC092437.1-201ENST00000624794 1048 ntBASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV18A0A075B6X5 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
TRAV18A0A075B6X5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV18A0A075B6X5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
TRAV18A0A075B6X5 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV18A0A075B6X5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV18A0A075B6X5 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV18A0A075B6X5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV18A0A075B6X5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV18A0A075B6X5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV18A0A075B6X5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV18A0A075B6X5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV18A0A075B6X5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV18A0A075B6X5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV18A0A075B6X5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV18A0A075B6X5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV18A0A075B6X5 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV18A0A075B6X5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms