Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.88■□□□□ 0.45
CSNK1G3Q9Y6M4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 AL121912.1-201ENST00000603683 238 ntBASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 AC004263.2-201ENST00000617183 678 ntBASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CSNK1G3Q9Y6M4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 AC079781.3-201ENST00000449110 356 ntBASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 AC009078.2-202ENST00000463353 338 ntBASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 AC106795.1-205ENST00000512851 1056 ntBASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 AL662844.1-201ENST00000546340 181 ntBASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1G3Q9Y6M4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 MINOS1P3-201ENST00000457048 203 ntBASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 AP005901.3-202ENST00000581653 237 ntBASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 AC009102.3-201ENST00000623118 1491 ntBASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CSNK1G3Q9Y6M4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 AP002469.2-201ENST00000531724 424 ntBASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSNK1G3Q9Y6M4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms