Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 AC010327.4-202ENST00000591484 748 ntBASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 Z83851.2-201ENST00000609564 659 ntBASIC19.94■□□□□ 0.78
SCN10AQ9Y5Y9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 MTDHP4-201ENST00000600287 670 ntBASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 FAM197Y3-203ENST00000618346 717 ntBASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 HLA-J-201ENST00000462773 1622 ntBASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.93■□□□□ 0.78
SCN10AQ9Y5Y9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 AC104109.2-201ENST00000602919 1418 ntBASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 AC079776.2-201ENST00000641154 1609 ntBASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 AC132938.6-201ENST00000623828 1655 ntBASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 KRT8P47-201ENST00000604727 1398 ntBASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 AC096633.1-201ENST00000422446 749 ntBASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 MED15P5-201ENST00000423150 992 ntBASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 AC007967.3-201ENST00000434308 558 ntBASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 AL591424.1-201ENST00000442569 1213 ntBASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.92■□□□□ 0.78
SCN10AQ9Y5Y9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 AC092910.1-201ENST00000482027 1129 ntBASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
SCN10AQ9Y5Y9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms