Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 AL022342.1-201ENST00000400363 863 ntBASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 AP002469.2-201ENST00000531724 424 ntBASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 AC074051.2-201ENST00000565115 352 ntBASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 FZD10-202ENST00000539839 3282 ntBASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGA9Q9Y5G4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 AL121912.1-201ENST00000603683 238 ntBASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 AL353801.3-201ENST00000609898 542 ntBASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 AC120498.9-201ENST00000339021 3867 ntBASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA9Q9Y5G4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 KRT8P32-201ENST00000512863 1461 ntBASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 IGHGP-201ENST00000390555 1178 ntBASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 GUSBP12-201ENST00000513727 720 ntBASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 AC009065.1-201ENST00000564055 1225 ntBASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 SLC25A6P4-201ENST00000586535 553 ntBASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA9Q9Y5G4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA9Q9Y5G4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms