Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB1Q9Y5G3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB1Q9Y5G3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHGB1Q9Y5G3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB1Q9Y5G3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PCDHGB1Q9Y5G3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
PCDHGB1Q9Y5G3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 RPS2P4-201ENST00000476944 856 ntBASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 AC142381.4-202ENST00000563973 229 ntBASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGB1Q9Y5G3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 PRKY-204ENST00000533551 1019 ntBASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 AC006058.3-201ENST00000606217 1069 ntBASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 AL139384.1-201ENST00000612143 3047 ntBASIC16.75■□□□□ 0.27
PCDHGB1Q9Y5G3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 HLA-A-209ENST00000638375 975 ntBASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB1Q9Y5G3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms