Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 CROCCP1-201ENST00000426910 5675 ntBASIC17.3■□□□□ 0.36
AP4S1Q9Y587 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 PHGDH-209ENST00000641074 1780 ntBASIC17.3■□□□□ 0.36
AP4S1Q9Y587 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
AP4S1Q9Y587 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 HTR7P1-201ENST00000538670 1336 ntBASIC17.29■□□□□ 0.36
AP4S1Q9Y587 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 ZNRF2P3-201ENST00000424200 374 ntBASIC17.29■□□□□ 0.36
AP4S1Q9Y587 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
AP4S1Q9Y587 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 POU5F1P3-201ENST00000428824 1078 ntBASIC17.28■□□□□ 0.36
AP4S1Q9Y587 AC120498.8-201ENST00000614275 531 ntBASIC17.28■□□□□ 0.36
AP4S1Q9Y587 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.28■□□□□ 0.36
AP4S1Q9Y587 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 KRT18P41-201ENST00000518924 1277 ntBASIC17.27■□□□□ 0.36
AP4S1Q9Y587 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.27■□□□□ 0.36
AP4S1Q9Y587 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms