Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF11Q9Y3C5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
RNF11Q9Y3C5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF11Q9Y3C5 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.83■□□□□ 0.45
RNF11Q9Y3C5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.83■□□□□ 0.45
RNF11Q9Y3C5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RNF11Q9Y3C5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 MIR4497-201ENST00000583208 89 ntBASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 AC116562.4-202ENST00000641738 218 ntBASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 LINC00896-202ENST00000609602 2128 ntBASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF11Q9Y3C5 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 INGX-201ENST00000359239 846 ntBASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 BX088651.1-201ENST00000540551 451 ntBASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 C2orf69P3-201ENST00000565542 1120 ntBASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF11Q9Y3C5 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 KRT8P9-201ENST00000558927 1449 ntBASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 REXO1L9P-201ENST00000604264 2108 ntBASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 PCDHA12-202ENST00000613593 2588 ntBASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 KRT18P23-201ENST00000435622 1283 ntBASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 AL163051.1-201ENST00000569214 1512 ntBASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF11Q9Y3C5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms