Protein–RNA interactions for Protein: Q9UIW0

VAX2, Ventral anterior homeobox 2, humanhuman

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAX2Q9UIW0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.35□□□□□ -0.11
VAX2Q9UIW0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.35□□□□□ -0.11
VAX2Q9UIW0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VAX2Q9UIW0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.35□□□□□ -0.11
VAX2Q9UIW0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.35□□□□□ -0.11
VAX2Q9UIW0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAX2Q9UIW0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAX2Q9UIW0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 NFIC-211ENST00000641145 8399 ntBASIC14.34□□□□□ -0.11
VAX2Q9UIW0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 UBALD1-205ENST00000590891 2641 ntBASIC14.34□□□□□ -0.11
VAX2Q9UIW0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 MYLKP1-201ENST00000509077 1580 ntBASIC14.34□□□□□ -0.11
VAX2Q9UIW0 AL357033.4-201ENST00000617703 1807 ntBASIC14.34□□□□□ -0.11
VAX2Q9UIW0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAX2Q9UIW0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VAX2Q9UIW0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
VAX2Q9UIW0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VAX2Q9UIW0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.33□□□□□ -0.11
VAX2Q9UIW0 PCDHB19P-201ENST00000570871 2371 ntBASIC14.33□□□□□ -0.11
VAX2Q9UIW0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VAX2Q9UIW0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VAX2Q9UIW0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VAX2Q9UIW0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 TUBB8P6-201ENST00000436895 1288 ntBASIC14.33□□□□□ -0.12
VAX2Q9UIW0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 KRT18P16-201ENST00000510337 1294 ntBASIC14.33□□□□□ -0.12
VAX2Q9UIW0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAX2Q9UIW0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAX2Q9UIW0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAX2Q9UIW0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
VAX2Q9UIW0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.32□□□□□ -0.12
VAX2Q9UIW0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
VAX2Q9UIW0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.32□□□□□ -0.12
VAX2Q9UIW0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
VAX2Q9UIW0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VAX2Q9UIW0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VAX2Q9UIW0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAX2Q9UIW0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAX2Q9UIW0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
VAX2Q9UIW0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAX2Q9UIW0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.32□□□□□ -0.12
VAX2Q9UIW0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAX2Q9UIW0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAX2Q9UIW0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms