Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.7■□□□□ 0.42
CPNE7Q9UBL6 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.7■□□□□ 0.42
CPNE7Q9UBL6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.7■□□□□ 0.42
CPNE7Q9UBL6 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.7■□□□□ 0.42
CPNE7Q9UBL6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.7■□□□□ 0.42
CPNE7Q9UBL6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE7Q9UBL6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE7Q9UBL6 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.7■□□□□ 0.42
CPNE7Q9UBL6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.7■□□□□ 0.42
CPNE7Q9UBL6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.7■□□□□ 0.42
CPNE7Q9UBL6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE7Q9UBL6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CPNE7Q9UBL6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE7Q9UBL6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE7Q9UBL6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CPNE7Q9UBL6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE7Q9UBL6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 AC012615.1-201ENST00000565797 1299 ntBASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CPNE7Q9UBL6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 AC233702.3-201ENST00000578656 1387 ntBASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 NUS1P1-201ENST00000446295 882 ntBASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 LINC01126-201ENST00000623515 1646 ntBASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 AC126763.1-201ENST00000552015 2118 ntBASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE7Q9UBL6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 VENTXP7-201ENST00000475503 772 ntBASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 Z69720.1-201ENST00000601483 472 ntBASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms