Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC073592.4-201ENST00000623827 446 ntBASIC19.31■□□□□ 0.68
CHD7Q9P2D1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHD7Q9P2D1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 AC254562.1-201ENST00000417586 456 ntBASIC19.3■□□□□ 0.68
CHD7Q9P2D1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.3■□□□□ 0.68
CHD7Q9P2D1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 BCRP1-201ENST00000444246 691 ntBASIC19.29■□□□□ 0.68
CHD7Q9P2D1 NKAPP1-205ENST00000585790 367 ntBASIC19.29■□□□□ 0.68
CHD7Q9P2D1 AC239800.4-201ENST00000603712 296 ntBASIC19.29■□□□□ 0.68
CHD7Q9P2D1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 AP002472.1-201ENST00000577490 586 ntBASIC19.29■□□□□ 0.68
CHD7Q9P2D1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 C20orf181-201ENST00000623918 480 ntBASIC19.29■□□□□ 0.68
CHD7Q9P2D1 SDHAP2-201ENST00000455183 2001 ntBASIC19.29■□□□□ 0.68
CHD7Q9P2D1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHD7Q9P2D1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 AC093028.1-201ENST00000622998 982 ntBASIC19.28■□□□□ 0.68
CHD7Q9P2D1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 MIR149-201ENST00000384879 89 ntBASIC19.28■□□□□ 0.68
CHD7Q9P2D1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD7Q9P2D1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 ELL2P1-201ENST00000413990 1906 ntBASIC19.27■□□□□ 0.68
CHD7Q9P2D1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD7Q9P2D1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms