Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 AP000997.3-201ENST00000623333 2250 ntBASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 HBZP1-201ENST00000354915 429 ntBASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 AC022616.7-201ENST00000525383 220 ntBASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 LINC00167-201ENST00000530583 1419 ntBASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 AL133373.2-201ENST00000623187 2828 ntBASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
BLOC1S4Q9NUP1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 SPDYE13P-201ENST00000445314 798 ntBASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 AC112907.2-201ENST00000448639 330 ntBASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
BLOC1S4Q9NUP1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 AC008764.6-201ENST00000595909 2069 ntBASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 NOC2LP2-201ENST00000407594 1944 ntBASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 AC024563.2-201ENST00000603282 481 ntBASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 FLJ13224-201ENST00000313737 1514 ntBASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
BLOC1S4Q9NUP1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms