Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 KRT18P67-201ENST00000432816 1264 ntBASIC18.85■□□□□ 0.61
BRD9Q9H8M2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
BRD9Q9H8M2 AL163051.1-201ENST00000569214 1512 ntBASIC18.84■□□□□ 0.61
BRD9Q9H8M2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 AL031284.1-201ENST00000419297 478 ntBASIC18.84■□□□□ 0.61
BRD9Q9H8M2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 AC093909.1-201ENST00000504731 1122 ntBASIC18.84■□□□□ 0.61
BRD9Q9H8M2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRD9Q9H8M2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRD9Q9H8M2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRD9Q9H8M2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRD9Q9H8M2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRD9Q9H8M2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.83■□□□□ 0.61
BRD9Q9H8M2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.83■□□□□ 0.61
BRD9Q9H8M2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRD9Q9H8M2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRD9Q9H8M2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 MIR574-201ENST00000385209 96 ntBASIC18.83■□□□□ 0.6
BRD9Q9H8M2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 RNA5SP419-201ENST00000515908 135 ntBASIC18.83■□□□□ 0.6
BRD9Q9H8M2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.83■□□□□ 0.6
BRD9Q9H8M2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 AC120498.9-201ENST00000339021 3867 ntBASIC18.82■□□□□ 0.6
BRD9Q9H8M2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 AC008687.5-201ENST00000593746 558 ntBASIC18.82■□□□□ 0.6
BRD9Q9H8M2 AC008608.2-201ENST00000606089 416 ntBASIC18.82■□□□□ 0.6
BRD9Q9H8M2 AC114341.1-201ENST00000618070 349 ntBASIC18.82■□□□□ 0.6
BRD9Q9H8M2 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.82■□□□□ 0.6
BRD9Q9H8M2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms