Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 AC097488.1-201ENST00000507834 756 ntBASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 GMCL1P1-201ENST00000463439 1581 ntBASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLR2J3Q9H1A7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 FLJ13224-201ENST00000313737 1514 ntBASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 KRT8P50-201ENST00000562022 1438 ntBASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 ABHD17AP1-201ENST00000358206 933 ntBASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 RPS2P55-201ENST00000397318 883 ntBASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 AC107956.1-201ENST00000494359 873 ntBASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.91■□□□□ 0.3
POLR2J3Q9H1A7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 AP005242.2-201ENST00000580065 1175 ntBASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
POLR2J3Q9H1A7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms